Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 RNA5SP229-201ENST00000410809 99 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 ATP5A1P2-201ENST00000412323 255 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 ARF4P2-201ENST00000430209 526 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AL158147.1-201ENST00000443970 75 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 YWHAEP4-201ENST00000505390 198 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AC011406.1-201ENST00000512440 370 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 RNU6-772P-201ENST00000516042 105 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AL365205.2-201ENST00000594586 68 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AC008739.3-201ENST00000603262 127 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AC073413.2-201ENST00000604332 360 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AL355297.2-201ENST00000604792 129 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 U3.45-201ENST00000607547 219 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AL353149.1-201ENST00000610667 244 ntBASIC2.9□□□□□ -1.95
SHISA3A0PJX4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.9□□□□□ -1.95
SHISA3A0PJX4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHISA3A0PJX4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.9□□□□□ -1.95
SHISA3A0PJX4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AC093010.3-201ENST00000570269 15214 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AL356274.2-201ENST00000624379 3752 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 MIR624-201ENST00000385217 97 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AL513477.1-202ENST00000417061 214 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 CST9LP2-201ENST00000437612 320 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AC092185.1-201ENST00000491371 97 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 SNORA67.7-201ENST00000516664 135 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 RNU6-365P-201ENST00000517113 106 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 CYCSP26-201ENST00000534107 320 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 MIR3121-201ENST00000579680 77 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 MIR4429-201ENST00000580105 73 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.89□□□□□ -1.95
SHISA3A0PJX4 AC018630.2-201ENST00000534866 2403 ntBASIC2.89□□□□□ -1.95
SHISA3A0PJX4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.88□□□□□ -1.95
SHISA3A0PJX4 RNU6-235P-201ENST00000362644 107 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 RNA5SP387-201ENST00000364226 106 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.294-201ENST00000364916 102 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SHISA3A0PJX4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SHISA3A0PJX4 RNA5SP127-201ENST00000411051 133 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 SRIP3-201ENST00000413200 219 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 AC003685.2-201ENST00000422795 395 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 SNORA18.4-201ENST00000516440 124 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 AL358944.1-201ENST00000528537 144 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 AC091178.2-201ENST00000584401 117 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 AL359075.3-201ENST00000613288 217 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 MIR8058-201ENST00000615737 89 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 AC008264.2-201ENST00000610193 3731 ntBASIC2.88□□□□□ -1.95
SHISA3A0PJX4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHISA3A0PJX4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
SHISA3A0PJX4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SHISA3A0PJX4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHISA3A0PJX4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SHISA3A0PJX4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHISA3A0PJX4 RNU6-647P-201ENST00000364243 107 ntBASIC2.87□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.525-201ENST00000384570 113 ntBASIC2.87□□□□□ -1.95
SHISA3A0PJX4 MIR670-201ENST00000390142 98 ntBASIC2.87□□□□□ -1.95
SHISA3A0PJX4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.87□□□□□ -1.95
SHISA3A0PJX4 HMGN1P7-201ENST00000491722 313 ntBASIC2.87□□□□□ -1.95
SHISA3A0PJX4 RNU7-128P-201ENST00000517247 62 ntBASIC2.87□□□□□ -1.95
SHISA3A0PJX4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.87□□□□□ -1.95
SHISA3A0PJX4 uc_338.1-201ENST00000612113 180 ntBASIC2.87□□□□□ -1.95
SHISA3A0PJX4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHISA3A0PJX4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.87□□□□□ -1.95
SHISA3A0PJX4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.87□□□□□ -1.95
SHISA3A0PJX4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.114-201ENST00000363265 113 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 RNU6-429P-201ENST00000384582 108 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 MIR592-201ENST00000384959 97 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 RNU6-220P-201ENST00000390919 107 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 AL031121.1-201ENST00000406553 254 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 MLLT10P1-201ENST00000418346 262 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 AC018634.1-201ENST00000437554 401 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 RNU6-504P-201ENST00000516568 104 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.690-201ENST00000516603 95 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 RNU6-667P-201ENST00000517186 102 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 AC087685.1-201ENST00000587507 141 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 MIR6075-201ENST00000620782 95 ntBASIC2.86□□□□□ -1.95
SHISA3A0PJX4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHISA3A0PJX4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHISA3A0PJX4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SHISA3A0PJX4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms