Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 RNU6-570P-201ENST00000517051 105 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 MIR4423-201ENST00000580922 80 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 MIR3935-201ENST00000583472 104 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 AC090425.1-201ENST00000610007 140 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 AL357075.2-201ENST00000614906 189 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.143-201ENST00000363520 106 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 RNU6-873P-201ENST00000363833 107 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 RNU6-743P-201ENST00000364151 106 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 MIR549A-201ENST00000385268 96 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 RNU6-482P-201ENST00000391068 107 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 MIR1294-201ENST00000408503 142 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 U3.40-201ENST00000408706 208 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 SNORD12B-201ENST00000410433 91 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 AL591806.2-201ENST00000433122 173 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 TRBVB-201ENST00000477100 408 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 AC145146.1-201ENST00000496370 254 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 AC093023.1-201ENST00000547375 507 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 CYP4A27P-201ENST00000567218 190 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 MIR5695-201ENST00000579717 85 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 AC005296.1-201ENST00000616145 209 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 MIR1248-201ENST00000629190 106 ntBASIC2.12□□□□□ -2.07
DDX43Q9NXZ2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 RNU6-879P-201ENST00000364328 108 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 SNORD32B-201ENST00000364460 84 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.350-201ENST00000365409 98 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 SNORD63-201ENST00000384262 68 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 RNU6-937P-201ENST00000384325 106 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.476-201ENST00000384347 108 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 RNU6-102P-201ENST00000384485 104 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.581-201ENST00000391017 97 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1093P-201ENST00000391194 107 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 RNU2-20P-201ENST00000410425 191 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 AC096920.1-201ENST00000423991 241 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.713-201ENST00000517013 96 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 AC012433.1-201ENST00000588916 398 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.772-201ENST00000606692 102 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 MIR376A1-201ENST00000616574 68 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 BX322639.1-202ENST00000423987 2213 ntBASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
DDX43Q9NXZ2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.60-201ENST00000362831 98 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-961P-201ENST00000363893 105 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-926P-201ENST00000384075 107 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-378P-201ENST00000384324 107 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.541-201ENST00000384640 113 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-541P-201ENST00000384709 110 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 SNORA46.1-201ENST00000391069 153 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNA5SP465-201ENST00000391195 109 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 AC005002.2-201ENST00000438228 269 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 HSPE1P25-201ENST00000455484 251 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RPS23P5-201ENST00000495419 428 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 AC108210.2-201ENST00000503681 201 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-496P-201ENST00000516145 99 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-567P-201ENST00000516746 107 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1198P-201ENST00000516904 67 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNA5SP54-201ENST00000516951 92 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-388P-201ENST00000517012 105 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 RNU6-389P-201ENST00000517048 105 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 DEFB131C-201ENST00000528817 165 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 MIR3128-201ENST00000581957 66 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 SNRPGP19-201ENST00000603826 189 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 AC127459.3-201ENST00000624328 466 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.1□□□□□ -2.07
DDX43Q9NXZ2 MIR335-201ENST00000362173 94 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.16-201ENST00000362421 102 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.462-201ENST00000384268 102 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 AC019129.1-201ENST00000403786 261 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 MIR1283-2-201ENST00000408621 87 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 AC004866.1-201ENST00000411748 78 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 MTND2P29-201ENST00000438595 412 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 AL353689.1-201ENST00000438895 199 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 RPL23AP3-201ENST00000453844 468 ntBASIC2.09□□□□□ -2.07
DDX43Q9NXZ2 AC093259.1-201ENST00000509755 300 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 268 ms