Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR3674-201ENST00000636576 68 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AL596028.1-201ENST00000326971 197 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.105-201ENST00000363182 111 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 RNU6-770P-201ENST00000363929 105 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.230-201ENST00000364348 109 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.462-201ENST00000384268 102 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 RNU6-937P-201ENST00000384325 106 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.570-201ENST00000384750 101 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SIX2Q9NPC8 MIR1185-2-201ENST00000408687 86 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 RNU6-121P-201ENST00000410525 99 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 EDDM3CP-201ENST00000415977 425 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.86□□□□□ -2.11
SIX2Q9NPC8 AC016717.1-201ENST00000448918 286 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 RNU6-498P-201ENST00000459468 107 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 AC025465.3-201ENST00000510570 311 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 RNU2-34P-201ENST00000516534 121 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 AC087441.2-201ENST00000529141 262 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 AC024614.2-201ENST00000577584 372 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 AC026271.5-201ENST00000577873 130 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 MIR4300-201ENST00000581016 96 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 AC005176.2-201ENST00000596933 147 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 AC022202.1-201ENST00000613515 211 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.86□□□□□ -2.11
SIX2Q9NPC8 LINC02555-201ENST00000563933 1951 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.26-201ENST00000362539 101 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 RNU6-806P-201ENST00000365147 105 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 RNU6-1310P-201ENST00000384153 107 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 SNORD63-201ENST00000384262 68 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 SNORD14D-201ENST00000384390 87 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 SNORD115-46-201ENST00000390982 71 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 RN7SKP284-201ENST00000411002 343 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AC139712.2-201ENST00000424302 339 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 MTND3P2-201ENST00000438452 342 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AL731563.1-201ENST00000442202 214 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AL357134.1-201ENST00000445848 426 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 LINC01399-202ENST00000458450 244 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.85□□□□□ -2.11
SIX2Q9NPC8 RNU6-1143P-201ENST00000516125 104 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 RNY3P15-201ENST00000516297 97 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 RNU6-948P-201ENST00000516374 107 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AC008269.2-201ENST00000561915 1105 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 MIR3126-201ENST00000577443 74 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.85□□□□□ -2.11
SIX2Q9NPC8 MIR6845-201ENST00000613182 61 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 MIR376A1-201ENST00000616574 68 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AC084768.2-201ENST00000622736 221 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 AC091932.3-201ENST00000624223 323 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 snoZ196.1-201ENST00000625269 89 ntBASIC1.85□□□□□ -2.11
SIX2Q9NPC8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.85□□□□□ -2.11
SIX2Q9NPC8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.19-201ENST00000362462 99 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 RNU6-454P-201ENST00000364292 107 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.574-201ENST00000384766 95 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 RNA5SP475-201ENST00000410568 110 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 RNU6-57P-201ENST00000411348 103 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 DYNLT3P2-201ENST00000442517 295 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.84□□□□□ -2.11
SIX2Q9NPC8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
SIX2Q9NPC8 RNU6-221P-201ENST00000459541 99 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 RNA5SP137-201ENST00000516833 135 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.84□□□□□ -2.11
SIX2Q9NPC8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.84□□□□□ -2.11
SIX2Q9NPC8 SNORD14A-201ENST00000606526 91 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 AC013412.1-201ENST00000610687 192 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 AC004467.1-201ENST00000615678 330 ntBASIC1.84□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.64-201ENST00000362845 102 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 Y_RNA.101-201ENST00000363154 102 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 Y_RNA.176-201ENST00000363815 109 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 SNORA72.2-201ENST00000365028 127 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 RNU6-1175P-201ENST00000365200 107 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.83□□□□□ -2.12
SIX2Q9NPC8 RNU1-52P-201ENST00000384190 164 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 Y_RNA.512-201ENST00000384518 102 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 RNU5A-5P-201ENST00000411054 116 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.83□□□□□ -2.12
SIX2Q9NPC8 MTCYBP9-201ENST00000431021 303 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 AC245102.2-201ENST00000448956 180 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 RPL23AP63-201ENST00000498752 471 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.83□□□□□ -2.12
SIX2Q9NPC8 MTCO2P24-201ENST00000515611 426 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 RNU6-856P-201ENST00000516959 98 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 AC022441.3-201ENST00000605737 136 ntBASIC1.83□□□□□ -2.12
SIX2Q9NPC8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SIX2Q9NPC8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SIX2Q9NPC8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SIX2Q9NPC8 Y_RNA.47-201ENST00000362697 108 ntBASIC1.82□□□□□ -2.12
SIX2Q9NPC8 RNU6-238P-201ENST00000363313 106 ntBASIC1.82□□□□□ -2.12
SIX2Q9NPC8 Y_RNA.149-201ENST00000363558 117 ntBASIC1.82□□□□□ -2.12
SIX2Q9NPC8 Y_RNA.222-201ENST00000364264 102 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms