Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU6-308P-201ENST00000390957 107 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 MIR1185-2-201ENST00000408687 86 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.32□□□□□ -2.2
NANOGQ9H9S0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-498P-201ENST00000459468 107 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.32□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.683-201ENST00000516508 93 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 RNU6-1198P-201ENST00000516904 67 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.32□□□□□ -2.2
NANOGQ9H9S0 AC080078.3-201ENST00000605407 463 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 AC103810.8-201ENST00000607347 118 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 AC011476.5-201ENST00000615594 130 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 snoZ196.1-201ENST00000625269 89 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 MIR338-201ENST00000636369 67 ntBASIC1.32□□□□□ -2.2
NANOGQ9H9S0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
NANOGQ9H9S0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
NANOGQ9H9S0 MIR378A-201ENST00000362177 66 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-490P-201ENST00000362985 107 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-454P-201ENST00000364292 107 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.813-201ENST00000364639 102 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-60P-201ENST00000364792 103 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.314-201ENST00000365114 102 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-926P-201ENST00000384075 107 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-439P-201ENST00000384188 106 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-296P-201ENST00000384608 107 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNA5SP467-201ENST00000391274 118 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 MTCO2P27-201ENST00000420740 428 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.31□□□□□ -2.2
NANOGQ9H9S0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-221P-201ENST00000459541 99 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AC010469.2-201ENST00000496412 480 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-948P-201ENST00000516374 107 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU4-77P-201ENST00000516692 156 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 RNU6-264P-201ENST00000517134 104 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AC022254.1-201ENST00000567857 235 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.31□□□□□ -2.2
NANOGQ9H9S0 SNORD58B-201ENST00000607313 66 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AC007485.1-201ENST00000616755 206 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AL008636.1-201ENST00000625038 1018 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.31□□□□□ -2.2
NANOGQ9H9S0 U6.108-201ENST00000637764 58 ntBASIC1.31□□□□□ -2.2
NANOGQ9H9S0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NANOGQ9H9S0 WWP1P1-201ENST00000466609 2769 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.61-201ENST00000362835 102 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.138-201ENST00000363462 102 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.146-201ENST00000363549 102 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 U3.8-201ENST00000363675 217 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 RNU6-457P-201ENST00000363999 107 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 RNU6-474P-201ENST00000384243 107 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 RNU6-417P-201ENST00000384712 107 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 MT-TD-201ENST00000387419 68 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 SNORA69.1-201ENST00000390904 137 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 AC114482.1-201ENST00000418010 247 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 MTND4P28-201ENST00000426217 387 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 AC108667.1-201ENST00000428618 249 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 ATP5J2P3-201ENST00000451550 258 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 SNORA40.9-201ENST00000515895 93 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 RN7SKP49-201ENST00000516675 260 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 RNU6-307P-201ENST00000516743 106 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 RNA5SP437-201ENST00000517249 129 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 AC005786.1-201ENST00000588553 154 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 AL080274.1-201ENST00000605565 220 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 uc_338.22-201ENST00000622722 187 ntBASIC1.3□□□□□ -2.2
NANOGQ9H9S0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NANOGQ9H9S0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NANOGQ9H9S0 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 SNORD42.2-201ENST00000365570 69 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 RNY1P14-201ENST00000384426 108 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.535-201ENST00000384612 99 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 MIR320B2-201ENST00000408479 138 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 SNORD12B-201ENST00000410433 91 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC018865.2-201ENST00000423631 129 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC005002.2-201ENST00000438228 269 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AL606517.2-201ENST00000442855 241 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.29□□□□□ -2.2
NANOGQ9H9S0 RNU6-107P-201ENST00000516643 102 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 SNORA31.17-201ENST00000516953 127 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 RNU7-128P-201ENST00000517247 62 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC027419.1-201ENST00000522976 328 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC084364.2-201ENST00000546924 395 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC018448.1-201ENST00000552843 316 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 MIR3198-2-201ENST00000577868 80 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.29□□□□□ -2.2
NANOGQ9H9S0 AC092447.9-201ENST00000603395 144 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 CYP2C61P-201ENST00000604072 290 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.29□□□□□ -2.2
NANOGQ9H9S0 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 1363.5 ms