Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 AC006461.1-201ENST00000412637 326 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 OR9P1P-201ENST00000496431 281 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 AC097462.1-201ENST00000514125 324 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 RNU7-175P-201ENST00000515915 61 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 AC134698.4-201ENST00000523451 826 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 AP002001.1-203ENST00000534002 267 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 MTND3P12-201ENST00000559068 328 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 DISC2.1-201ENST00000612827 205 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 AL138726.1-201ENST00000614873 333 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 AL359880.1-201ENST00000621879 266 ntBASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
LRRC40Q9H9A6 Y_RNA.267-201ENST00000364679 109 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 MTCO3P18-201ENST00000440206 761 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 LINC01399-202ENST00000458450 244 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 AP000870.1-201ENST00000472927 406 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 AC107401.1-201ENST00000503426 685 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 BNIP3P10-201ENST00000605360 577 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 AC124303.1-201ENST00000605703 360 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
LRRC40Q9H9A6 AC005592.1-201ENST00000566527 1640 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 MIR10B-201ENST00000385011 110 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 MTATP6P13-201ENST00000438531 667 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AC104332.1-201ENST00000440471 797 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 RNU7-21P-201ENST00000459430 62 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AC091021.1-201ENST00000468051 388 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 RNU6-1281P-201ENST00000516223 105 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 RNU6-405P-201ENST00000516637 110 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 MIR5696-201ENST00000578474 85 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AL162413.1-201ENST00000603198 110 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AC092954.2-201ENST00000609103 430 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 AC108706.1-201ENST00000611053 297 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
LRRC40Q9H9A6 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 MTND1P26-201ENST00000440488 538 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 MTCO2P7-201ENST00000446518 666 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 AC010486.3-201ENST00000511602 785 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.683-201ENST00000516508 93 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 RNU6-256P-201ENST00000516747 97 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 RNA5SP102-201ENST00000516865 106 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 RNU6-341P-201ENST00000516973 96 ntBASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.77□□□□□ -2.29
LRRC40Q9H9A6 SNORA20B-201ENST00000384220 132 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.530-201ENST00000384587 101 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 RNA5SP482-201ENST00000391269 118 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 ZNF885P-201ENST00000420174 1098 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 AC004941.2-201ENST00000427009 228 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 RPEP5-201ENST00000441137 268 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 AP002004.2-201ENST00000531656 154 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 AL117336.2-201ENST00000602435 335 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 PRELID3BP2-201ENST00000605362 201 ntBASIC0.76□□□□□ -2.29
LRRC40Q9H9A6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 MIR96-201ENST00000362288 78 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 SNORA1B-201ENST00000362535 133 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 RNA5SP361-201ENST00000362686 118 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 SNORD116-13-201ENST00000384408 92 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 RNU6-376P-201ENST00000384731 106 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 RNU2-66P-201ENST00000410650 161 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 AC243428.1-201ENST00000421099 264 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.704-201ENST00000516851 102 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 MIR4273-201ENST00000582824 84 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 MIR3672-201ENST00000584290 82 ntBASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LRRC40Q9H9A6 CASC19-280ENST00000642102 1351 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 MIR337-201ENST00000362281 93 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 RNA5SP432-201ENST00000362480 116 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 RNU6-407P-201ENST00000365280 104 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.405-201ENST00000383979 100 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 RNU6-483P-201ENST00000384088 108 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.451-201ENST00000384200 100 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.524-201ENST00000384564 100 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.561-201ENST00000384694 100 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 SNORA75.2-201ENST00000391138 150 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 SNORA75.3-201ENST00000391231 150 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 RPS4XP11-201ENST00000446897 772 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms