Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.76□□□□□ -2.13
CMTM3Q96MX0 HSPE1P21-201ENST00000438283 308 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 snoU13.27-201ENST00000459278 104 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 RNU4-77P-201ENST00000516692 156 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 MIR6873-201ENST00000622788 63 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 AL606534.2-204ENST00000635008 178 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 IGHVIII-44-202ENST00000636235 289 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 U6.92-201ENST00000636464 89 ntBASIC1.76□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.111-201ENST00000363248 100 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 SNORA4.2-201ENST00000365313 147 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.395-201ENST00000383945 109 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.419-201ENST00000384041 102 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 RNA5SP109-201ENST00000391010 116 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 RPL21P1-201ENST00000399532 476 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 COX6CP10-201ENST00000416832 224 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.75□□□□□ -2.13
CMTM3Q96MX0 AL121890.1-201ENST00000435457 205 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 RPS27P1-201ENST00000450552 247 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.75□□□□□ -2.13
CMTM3Q96MX0 RNA5SP20-201ENST00000515976 84 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 AC022217.4-201ENST00000604389 163 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 AL050343.2-201ENST00000607338 280 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 AC240442.1-201ENST00000616055 283 ntBASIC1.75□□□□□ -2.13
CMTM3Q96MX0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CMTM3Q96MX0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CMTM3Q96MX0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CMTM3Q96MX0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CMTM3Q96MX0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CMTM3Q96MX0 MIR424-201ENST00000362227 98 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 SNORD114-7-201ENST00000362520 77 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 RNU1-22P-201ENST00000363334 158 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 RNU6-626P-201ENST00000363354 107 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 MIR1267-201ENST00000408723 78 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 RNA5SP508-201ENST00000411327 119 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 SDAD1P3-201ENST00000427380 333 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 AL160004.2-201ENST00000432935 350 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 AL606517.2-201ENST00000442855 241 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 AL137792.2-201ENST00000443484 235 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 RNU7-94P-201ENST00000459576 63 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 AC097462.1-201ENST00000514125 324 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 SNORA40.14-201ENST00000516543 86 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 RNU7-172P-201ENST00000517125 64 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 AC023442.1-201ENST00000531247 422 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 AC055872.1-201ENST00000570978 278 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.74□□□□□ -2.13
CMTM3Q96MX0 SNORA77B-201ENST00000578179 125 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 MIR5188-201ENST00000583467 113 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 AC011476.5-201ENST00000615594 130 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 uc_338.22-201ENST00000622722 187 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
CMTM3Q96MX0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CMTM3Q96MX0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CMTM3Q96MX0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CMTM3Q96MX0 RNU6-407P-201ENST00000365280 104 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 SNORD42.2-201ENST00000365570 69 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 RNU6-20P-201ENST00000384106 107 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 RNU6-950P-201ENST00000384651 107 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 RNU11-5P-201ENST00000391216 129 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 MIR873-201ENST00000401120 77 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.73□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.639-201ENST00000458981 102 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 RNA5SP281-201ENST00000516504 135 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 RNU2-12P-201ENST00000517216 168 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 MIR4709-201ENST00000577272 72 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 AC005176.2-201ENST00000596933 147 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 AC006380.1-201ENST00000603598 186 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 SNORD58B-201ENST00000607313 66 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 AC006157.1-201ENST00000611750 366 ntBASIC1.73□□□□□ -2.13
CMTM3Q96MX0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CMTM3Q96MX0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.72□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.61-201ENST00000362835 102 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 RNY1P14-201ENST00000384426 108 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 Y_RNA.500-201ENST00000384466 111 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 RN7SKP192-201ENST00000411291 327 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
CMTM3Q96MX0 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 AC010205.1-201ENST00000616668 449 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 AC018630.2-201ENST00000534866 2403 ntBASIC1.72□□□□□ -2.13
CMTM3Q96MX0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CMTM3Q96MX0 AC100821.1-201ENST00000523153 2479 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 MRPL42P3-201ENST00000401492 326 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 RNU2-54P-201ENST00000410299 190 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 RNU4-53P-201ENST00000410828 140 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 AC009963.1-201ENST00000417265 157 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 AC245047.3-201ENST00000429428 127 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 AC005908.1-201ENST00000468701 347 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.71□□□□□ -2.14
CMTM3Q96MX0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.71□□□□□ -2.14
CMTM3Q96MX0 RPL21P9-201ENST00000556149 474 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 DEFB122-202ENST00000569013 197 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 RPS29P30-201ENST00000600975 111 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 AC073413.2-201ENST00000604332 360 ntBASIC1.71□□□□□ -2.14
CMTM3Q96MX0 AC016925.2-201ENST00000605108 242 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms