Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
HMGCS1Q01581 Y_RNA.404-201ENST00000383978 102 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 MIR618-201ENST00000385287 98 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 MIR190B-201ENST00000401119 79 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 RNU6-1001P-201ENST00000411265 100 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 USP9YP16-201ENST00000430287 407 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AL353997.1-201ENST00000432936 108 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGCS1Q01581 USP9YP23-201ENST00000455085 407 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 U8.22-201ENST00000459141 133 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 RNU7-34P-201ENST00000459394 64 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 RPL30P7-201ENST00000479312 323 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 SNORA31.10-201ENST00000516482 106 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 RNU6-107P-201ENST00000516643 102 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC093023.1-201ENST00000547375 507 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC011712.1-201ENST00000588959 234 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC125232.2-201ENST00000592457 143 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC080078.2-201ENST00000603766 501 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC009229.3-201ENST00000608056 282 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AL359075.3-201ENST00000613288 217 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 AC098679.4-201ENST00000624241 654 ntBASIC1.07□□□□□ -2.24
HMGCS1Q01581 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMGCS1Q01581 SNORD33-201ENST00000362761 85 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 Y_RNA.88-201ENST00000363029 99 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 Y_RNA.184-201ENST00000363884 108 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 RNU6-601P-201ENST00000384540 107 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 MRPL35P1-201ENST00000404272 572 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGCS1Q01581 EIF1P2-201ENST00000428233 350 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.06□□□□□ -2.24
HMGCS1Q01581 MTND3P10-201ENST00000450967 341 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 FGF7P6-202ENST00000451282 293 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 SNORD65B-201ENST00000459126 73 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 RNU7-87P-201ENST00000459343 62 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 RPS26P45-201ENST00000471748 340 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGCS1Q01581 Y_RNA.683-201ENST00000516508 93 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 RNU7-30P-201ENST00000516835 62 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 MTND4LP26-201ENST00000518144 282 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGCS1Q01581 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGCS1Q01581 AL357075.2-201ENST00000614906 189 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 U6.73-201ENST00000619194 103 ntBASIC1.06□□□□□ -2.24
HMGCS1Q01581 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
HMGCS1Q01581 RNY1P16-201ENST00000363063 111 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 RNU6-53P-201ENST00000365367 106 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 Y_RNA.557-201ENST00000384680 107 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 MIR329-1-201ENST00000385028 80 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HMGCS1Q01581 RPL37P10-201ENST00000412884 288 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 TOMM22P2-201ENST00000430735 237 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 AC107399.1-201ENST00000451226 265 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGCS1Q01581 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.05□□□□□ -2.24
HMGCS1Q01581 Y_RNA.708-201ENST00000516950 96 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 AC105029.1-201ENST00000520250 669 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 AC023157.2-201ENST00000540596 141 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 AL121579.1-201ENST00000555129 305 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 MIR3937-201ENST00000580135 106 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGCS1Q01581 AC021506.2-201ENST00000612354 169 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 CASC19-280ENST00000642102 1351 ntBASIC1.05□□□□□ -2.24
HMGCS1Q01581 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGCS1Q01581 RNA5SP361-201ENST00000362686 118 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 RNU6-1266P-201ENST00000362794 105 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 Y_RNA.72-201ENST00000362894 103 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 RNU5F-3P-201ENST00000363767 117 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 Y_RNA.482-201ENST00000384377 111 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGCS1Q01581 RNU4-14P-201ENST00000410858 122 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 Y_RNA.619-201ENST00000410951 90 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 ELOCP21-201ENST00000412558 336 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGCS1Q01581 RNU6-1213P-201ENST00000517075 94 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGCS1Q01581 RAB11AP2-201ENST00000545905 639 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 AL137100.2-201ENST00000555786 315 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC090617.3-201ENST00000573670 475 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC022432.1-201ENST00000595739 310 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 AL365434.2-201ENST00000607979 234 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 MIR8054-201ENST00000620877 86 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 AC091895.1-201ENST00000624494 256 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGCS1Q01581 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.04□□□□□ -2.24
HMGCS1Q01581 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HMGCS1Q01581 RNY1P10-201ENST00000363268 113 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 RNU6-593P-201ENST00000364716 112 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 Y_RNA.364-201ENST00000365532 101 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 RNU6-1145P-201ENST00000384246 107 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 RNU6-1031P-201ENST00000384773 107 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 SNORA12.1-201ENST00000390873 148 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 389.7 ms