Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL159152.1-201ENST00000635019 2587 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.13□□□□□ -1.91
EPHB3P54753 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
EPHB3P54753 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
EPHB3P54753 AC073325.2-201ENST00000339545 159 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 SNORA25.7-201ENST00000364375 127 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 MIR586-201ENST00000385035 97 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
EPHB3P54753 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 RNA5SP274-201ENST00000410484 108 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 AL357134.1-201ENST00000445848 426 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.12□□□□□ -1.91
EPHB3P54753 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 AC026241.1-201ENST00000517873 2142 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 RPL17P51-201ENST00000605218 238 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.12□□□□□ -1.91
EPHB3P54753 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
EPHB3P54753 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EPHB3P54753 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EPHB3P54753 AP003122.5-201ENST00000527668 3766 ntBASIC3.12□□□□□ -1.91
EPHB3P54753 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
EPHB3P54753 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
EPHB3P54753 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
EPHB3P54753 SNORD45.3-201ENST00000363836 72 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 Y_RNA.280-201ENST00000364765 112 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 SNORA36B-201ENST00000410438 131 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 HSPE1P21-201ENST00000438283 308 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 RPL23AP7-203ENST00000449021 469 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.11□□□□□ -1.91
EPHB3P54753 GTF3AP2-201ENST00000557014 266 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 AP003357.1-201ENST00000604497 148 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 U1.23-201ENST00000610293 146 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 RNU1-68P-201ENST00000615382 146 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 AC007318.2-201ENST00000620999 243 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 U1.39-201ENST00000621562 146 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
EPHB3P54753 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.11□□□□□ -1.91
EPHB3P54753 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
EPHB3P54753 AC069528.2-201ENST00000624849 1991 ntBASIC3.11□□□□□ -1.91
EPHB3P54753 RNU6-655P-201ENST00000362858 107 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 Y_RNA.124-201ENST00000363339 93 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 RNU6-1082P-201ENST00000364574 107 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 SNORA9.2-201ENST00000365361 133 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 Y_RNA.584-201ENST00000391090 114 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 MIR873-201ENST00000401120 77 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 MIR1185-2-201ENST00000408687 86 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHB3P54753 AL135938.1-201ENST00000443141 297 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHB3P54753 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHB3P54753 AC117454.1-201ENST00000491120 168 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.1□□□□□ -1.91
EPHB3P54753 AC091826.1-201ENST00000514065 313 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 RNU6-772P-201ENST00000516042 105 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 MIR4679-2-201ENST00000578358 77 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 Y_RNA.757-201ENST00000578934 114 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.1□□□□□ -1.91
EPHB3P54753 AC120024.3-201ENST00000603167 156 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 U6.95-201ENST00000636931 70 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 AC096644.4-201ENST00000563417 2912 ntBASIC3.1□□□□□ -1.91
EPHB3P54753 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EPHB3P54753 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
EPHB3P54753 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
EPHB3P54753 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.09□□□□□ -1.91
EPHB3P54753 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 RNU6-1255P-201ENST00000363434 112 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 RNA5SP139-201ENST00000364340 117 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 SNORA40.5-201ENST00000391061 128 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 RN7SKP101-201ENST00000411376 320 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 AC245047.4-201ENST00000433189 144 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 RPL36AP21-201ENST00000490372 323 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
EPHB3P54753 AC090142.3-201ENST00000519012 385 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.09□□□□□ -1.91
EPHB3P54753 MIR378D2-201ENST00000580636 98 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 AC006023.1-201ENST00000603944 259 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 AC068647.2-201ENST00000637380 353 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 AC010889.1-201ENST00000566193 2666 ntBASIC3.09□□□□□ -1.91
EPHB3P54753 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
EPHB3P54753 RNU6-1323P-201ENST00000384025 107 ntBASIC3.08□□□□□ -1.92
EPHB3P54753 MIR147B-201ENST00000390185 80 ntBASIC3.08□□□□□ -1.92
EPHB3P54753 RNU2-49P-201ENST00000410666 184 ntBASIC3.08□□□□□ -1.92
EPHB3P54753 TRIAP1P1-201ENST00000427062 225 ntBASIC3.08□□□□□ -1.92
EPHB3P54753 AC105272.1-201ENST00000438604 198 ntBASIC3.08□□□□□ -1.92
EPHB3P54753 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.08□□□□□ -1.92
EPHB3P54753 RN7SL442P-201ENST00000473804 320 ntBASIC3.08□□□□□ -1.92
EPHB3P54753 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.08□□□□□ -1.92
EPHB3P54753 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EPHB3P54753 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EPHB3P54753 AL035425.3-201ENST00000564206 4996 ntBASIC3.08□□□□□ -1.92
EPHB3P54753 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.07□□□□□ -1.92
EPHB3P54753 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms