Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RPS26P42-201ENST00000413485 326 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AC019205.3-201ENST00000424573 156 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AC078809.1-201ENST00000427601 140 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 SUMO1P4-201ENST00000429430 302 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AL121594.1-201ENST00000475906 575 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AC104435.1-201ENST00000483483 166 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.44□□□□□ -2.02
SNHG28P0DPA3 YWHAEP4-201ENST00000505390 198 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-436P-201ENST00000516171 114 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 ACA59.2-201ENST00000517061 156 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 MIR548AI-201ENST00000579940 88 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AC100821.1-201ENST00000523153 2479 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SNHG28P0DPA3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SNHG28P0DPA3 RNU4-10P-201ENST00000364383 140 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AL390729.2-201ENST00000416137 156 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 SEPT7P4-201ENST00000437076 306 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AC006026.2-201ENST00000457376 180 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 UBL5P3-201ENST00000475112 231 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 RNU6-155P-201ENST00000516347 100 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 RNU6-426P-201ENST00000516464 97 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 SNORD116-25-201ENST00000516517 92 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 HSPE1P7-201ENST00000604681 321 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AP001485.1-201ENST00000604799 199 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AC009487.4-201ENST00000624969 3585 ntBASIC2.43□□□□□ -2.02
SNHG28P0DPA3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SNHG28P0DPA3 AC026241.1-201ENST00000517873 2142 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 MIR569-201ENST00000385228 96 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 SNORA26.5-201ENST00000391215 123 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 RNU6-257P-201ENST00000410238 98 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 RNU2-54P-201ENST00000410299 190 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AC096649.2-201ENST00000416186 393 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 BTF3P11-201ENST00000426582 477 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AL162725.1-201ENST00000435405 301 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 RNU2-12P-201ENST00000517216 168 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AC021231.3-201ENST00000558497 370 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AL138963.2-201ENST00000605137 226 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.42□□□□□ -2.02
SNHG28P0DPA3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNHG28P0DPA3 AC092268.1-201ENST00000342691 405 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 snoU2_19.4-201ENST00000364329 80 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 SNORD87-201ENST00000364849 89 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 RNU6-793P-201ENST00000384233 104 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 RNU6-1117P-201ENST00000384525 104 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 RNA5SP38-201ENST00000410750 119 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 AL513477.1-202ENST00000417061 214 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 snoU13.26-201ENST00000459452 105 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.41□□□□□ -2.02
SNHG28P0DPA3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.41□□□□□ -2.02
SNHG28P0DPA3 SCARNA8-201ENST00000515924 131 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.41□□□□□ -2.02
SNHG28P0DPA3 AC090616.3-201ENST00000582184 217 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 MIR6076-201ENST00000617521 113 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
SNHG28P0DPA3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.41□□□□□ -2.02
SNHG28P0DPA3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
SNHG28P0DPA3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SNHG28P0DPA3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SNHG28P0DPA3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SNHG28P0DPA3 AC134026.1-201ENST00000623249 2239 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNHG28P0DPA3 RNU4-84P-201ENST00000364200 139 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 CBX3P9-201ENST00000402326 552 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 U3.40-201ENST00000408706 208 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 RNU2-51P-201ENST00000410708 197 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.4□□□□□ -2.03
SNHG28P0DPA3 RPL26P9-201ENST00000457466 433 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.4□□□□□ -2.03
SNHG28P0DPA3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 RNA5SP54-201ENST00000516951 92 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 AC100767.1-201ENST00000528178 123 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 SNORD98-201ENST00000636377 67 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms