Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 MIR2276-201ENST00000516886 89 ntBASIC3.11□□□□□ -1.91
SYPP08247 RNU6-971P-201ENST00000516920 106 ntBASIC3.11□□□□□ -1.91
SYPP08247 RNU6-586P-201ENST00000517265 104 ntBASIC3.11□□□□□ -1.91
SYPP08247 ELOCP29-201ENST00000588193 334 ntBASIC3.11□□□□□ -1.91
SYPP08247 POLR3GP1-201ENST00000594073 261 ntBASIC3.11□□□□□ -1.91
SYPP08247 AC005972.2-201ENST00000604690 348 ntBASIC3.11□□□□□ -1.91
SYPP08247 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
SYPP08247 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
SYPP08247 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
SYPP08247 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SYPP08247 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SYPP08247 Y_RNA.81-201ENST00000362997 102 ntBASIC3.1□□□□□ -1.91
SYPP08247 Y_RNA.218-201ENST00000364218 104 ntBASIC3.1□□□□□ -1.91
SYPP08247 Y_RNA.420-201ENST00000384043 110 ntBASIC3.1□□□□□ -1.91
SYPP08247 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
SYPP08247 Y_RNA.629-201ENST00000411368 105 ntBASIC3.1□□□□□ -1.91
SYPP08247 EEF1A1P41-201ENST00000414667 207 ntBASIC3.1□□□□□ -1.91
SYPP08247 AL135786.1-201ENST00000415892 214 ntBASIC3.1□□□□□ -1.91
SYPP08247 RPL30P4-201ENST00000429309 333 ntBASIC3.1□□□□□ -1.91
SYPP08247 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
SYPP08247 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.1□□□□□ -1.91
SYPP08247 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.1□□□□□ -1.91
SYPP08247 RNA5SP20-201ENST00000515976 84 ntBASIC3.1□□□□□ -1.91
SYPP08247 RNU7-116P-201ENST00000516940 62 ntBASIC3.1□□□□□ -1.91
SYPP08247 AC025647.1-201ENST00000517879 253 ntBASIC3.1□□□□□ -1.91
SYPP08247 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SYPP08247 ZNF702P-202ENST00000434269 1966 ntBASIC3.1□□□□□ -1.91
SYPP08247 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SYPP08247 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SYPP08247 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYPP08247 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SYPP08247 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
SYPP08247 RNA5SP205-201ENST00000364653 136 ntBASIC3.09□□□□□ -1.91
SYPP08247 Y_RNA.542-201ENST00000384641 111 ntBASIC3.09□□□□□ -1.91
SYPP08247 RNU6-768P-201ENST00000384683 107 ntBASIC3.09□□□□□ -1.91
SYPP08247 SNORD37.2-201ENST00000391075 66 ntBASIC3.09□□□□□ -1.91
SYPP08247 Z82209.1-201ENST00000422141 2135 ntBASIC3.09□□□□□ -1.91
SYPP08247 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
SYPP08247 RPL23AP58-201ENST00000440453 469 ntBASIC3.09□□□□□ -1.91
SYPP08247 RAC1P5-201ENST00000512182 576 ntBASIC3.09□□□□□ -1.91
SYPP08247 RNA5SP356-201ENST00000515972 94 ntBASIC3.09□□□□□ -1.91
SYPP08247 RNU6-948P-201ENST00000516374 107 ntBASIC3.09□□□□□ -1.91
SYPP08247 AC027419.1-201ENST00000522976 328 ntBASIC3.09□□□□□ -1.91
SYPP08247 GTF3AP2-201ENST00000557014 266 ntBASIC3.09□□□□□ -1.91
SYPP08247 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SYPP08247 MIR3646-201ENST00000578301 84 ntBASIC3.09□□□□□ -1.91
SYPP08247 MIR3162-201ENST00000581818 82 ntBASIC3.09□□□□□ -1.91
SYPP08247 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SYPP08247 uc_338.25-201ENST00000613756 156 ntBASIC3.09□□□□□ -1.91
SYPP08247 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.09□□□□□ -1.91
SYPP08247 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.09□□□□□ -1.91
SYPP08247 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.09□□□□□ -1.91
SYPP08247 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
SYPP08247 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SYPP08247 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.92
SYPP08247 AC009487.4-201ENST00000624969 3585 ntBASIC3.08□□□□□ -1.92
SYPP08247 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.08□□□□□ -1.92
SYPP08247 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
SYPP08247 MIR449A-201ENST00000362113 91 ntBASIC3.08□□□□□ -1.92
SYPP08247 Y_RNA.71-201ENST00000362892 104 ntBASIC3.08□□□□□ -1.92
SYPP08247 Y_RNA.127-201ENST00000363386 109 ntBASIC3.08□□□□□ -1.92
SYPP08247 Y_RNA.261-201ENST00000364631 102 ntBASIC3.08□□□□□ -1.92
SYPP08247 RNA5SP126-201ENST00000365092 109 ntBASIC3.08□□□□□ -1.92
SYPP08247 RNU6-1235P-201ENST00000384559 107 ntBASIC3.08□□□□□ -1.92
SYPP08247 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SYPP08247 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
SYPP08247 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.08□□□□□ -1.92
SYPP08247 RNU6-437P-201ENST00000459408 95 ntBASIC3.08□□□□□ -1.92
SYPP08247 RNU6-498P-201ENST00000459468 107 ntBASIC3.08□□□□□ -1.92
SYPP08247 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
SYPP08247 AC010531.2-201ENST00000465012 153 ntBASIC3.08□□□□□ -1.92
SYPP08247 RNU6-63P-201ENST00000516690 95 ntBASIC3.08□□□□□ -1.92
SYPP08247 AC006435.5-201ENST00000624486 112 ntBASIC3.08□□□□□ -1.92
SYPP08247 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
SYPP08247 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.07□□□□□ -1.92
SYPP08247 RNU6-674P-201ENST00000363831 107 ntBASIC3.07□□□□□ -1.92
SYPP08247 MIR539-201ENST00000365690 78 ntBASIC3.07□□□□□ -1.92
SYPP08247 Y_RNA.393-201ENST00000383936 102 ntBASIC3.07□□□□□ -1.92
SYPP08247 RNU6-418P-201ENST00000384035 107 ntBASIC3.07□□□□□ -1.92
SYPP08247 SNORA48.8-201ENST00000391324 134 ntBASIC3.07□□□□□ -1.92
SYPP08247 RN7SKP101-201ENST00000411376 320 ntBASIC3.07□□□□□ -1.92
SYPP08247 AC016909.1-201ENST00000415916 166 ntBASIC3.07□□□□□ -1.92
SYPP08247 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.07□□□□□ -1.92
SYPP08247 RPS12P18-201ENST00000442381 270 ntBASIC3.07□□□□□ -1.92
SYPP08247 AC092991.1-201ENST00000477176 376 ntBASIC3.07□□□□□ -1.92
SYPP08247 RPL23AP54-201ENST00000495129 419 ntBASIC3.07□□□□□ -1.92
SYPP08247 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.07□□□□□ -1.92
SYPP08247 RNA5SP367-201ENST00000516557 118 ntBASIC3.07□□□□□ -1.92
SYPP08247 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.07□□□□□ -1.92
SYPP08247 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.07□□□□□ -1.92
SYPP08247 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SYPP08247 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SYPP08247 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SYPP08247 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.06□□□□□ -1.92
SYPP08247 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SYPP08247 SNORD45.3-201ENST00000363836 72 ntBASIC3.06□□□□□ -1.92
SYPP08247 RNA5SP139-201ENST00000364340 117 ntBASIC3.06□□□□□ -1.92
SYPP08247 RNU6-117P-201ENST00000365415 107 ntBASIC3.06□□□□□ -1.92
SYPP08247 SNORD116-14-201ENST00000383894 92 ntBASIC3.06□□□□□ -1.92
SYPP08247 SNORD116-17-201ENST00000383929 92 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms