Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 SNORA77B-201ENST00000578179 125 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 MIR1244-1-201ENST00000612829 85 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 MIR1244-3-201ENST00000635744 85 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 MIR1244-2-201ENST00000636449 85 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 MIR1244-4-202ENST00000636813 85 ntBASIC1.48□□□□□ -2.17
ATG4BQ9Y4P1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-99P-201ENST00000364721 107 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 RNA5SP467-201ENST00000391274 118 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 MIR1267-201ENST00000408723 78 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 RPL17P19-201ENST00000489069 552 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 AC022868.1-201ENST00000517767 391 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 AC091144.1-201ENST00000519573 138 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 AC090617.3-201ENST00000573670 475 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 AC125232.2-201ENST00000592457 143 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 AL355073.2-201ENST00000612106 557 ntBASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
ATG4BQ9Y4P1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 MIR1185-2-201ENST00000408687 86 ntBASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 Y_RNA.646-201ENST00000410980 101 ntBASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 UQCRBP2-201ENST00000447827 297 ntBASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-559P-201ENST00000516151 98 ntBASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
ATG4BQ9Y4P1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 RNA5SP361-201ENST00000362686 118 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-310P-201ENST00000384655 107 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 MIR1323-201ENST00000408090 73 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 EIF1P2-201ENST00000428233 350 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 AC073910.1-201ENST00000445047 438 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 MTND4P18-201ENST00000447010 465 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 RPL30P15-201ENST00000457129 321 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 U8.22-201ENST00000459141 133 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 AC005908.1-201ENST00000468701 347 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-970P-201ENST00000516312 107 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 AC027419.1-201ENST00000522976 328 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 APOOP3-201ENST00000536787 586 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 MIR5690-201ENST00000583739 73 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
ATG4BQ9Y4P1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 MIR126-201ENST00000362291 85 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 SNORD33-201ENST00000362761 85 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 SNORA72.1-201ENST00000363485 129 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 Y_RNA.142-201ENST00000363491 102 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-1188P-201ENST00000363795 107 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 UBE2V1P7-201ENST00000446395 340 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 MIR2053-201ENST00000459295 91 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 AC022493.2-201ENST00000506122 481 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-264P-201ENST00000517134 104 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 RBM11P1-201ENST00000604951 799 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 AC113139.1-201ENST00000605049 239 ntBASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ATG4BQ9Y4P1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 Y_RNA.474-201ENST00000384341 102 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 MIR329-1-201ENST00000385028 80 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 AL161935.2-201ENST00000414627 60 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 snoU13.27-201ENST00000459278 104 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 FRG2DP-202ENST00000566967 323 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 AL357075.2-201ENST00000614906 189 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 AC100821.1-201ENST00000523153 2479 ntBASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.43□□□□□ -2.18
ATG4BQ9Y4P1 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 SNORA4.2-201ENST00000365313 147 ntBASIC1.42□□□□□ -2.18
ATG4BQ9Y4P1 RNU6-890P-201ENST00000384121 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms