Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 RNU6-1198P-201ENST00000516904 67 ntBASIC1.11□□□□□ -2.23
KIF3AQ9Y496 AC023157.2-201ENST00000540596 141 ntBASIC1.11□□□□□ -2.23
KIF3AQ9Y496 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.11□□□□□ -2.23
KIF3AQ9Y496 AC022432.1-201ENST00000595739 310 ntBASIC1.11□□□□□ -2.23
KIF3AQ9Y496 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KIF3AQ9Y496 Y_RNA.100-201ENST00000363141 102 ntBASIC1.1□□□□□ -2.23
KIF3AQ9Y496 RNU6-159P-201ENST00000391080 106 ntBASIC1.1□□□□□ -2.23
KIF3AQ9Y496 RNU6-332P-201ENST00000391193 108 ntBASIC1.1□□□□□ -2.23
KIF3AQ9Y496 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.1□□□□□ -2.23
KIF3AQ9Y496 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.1□□□□□ -2.23
KIF3AQ9Y496 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.1□□□□□ -2.23
KIF3AQ9Y496 PIGPP4-201ENST00000584447 307 ntBASIC1.1□□□□□ -2.23
KIF3AQ9Y496 RNU6-451P-201ENST00000362921 107 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 RNU1-124P-201ENST00000363861 145 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 SNORA25.9-201ENST00000365087 128 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 RNU6-793P-201ENST00000384233 104 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 AL034345.1-201ENST00000407768 123 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.09□□□□□ -2.23
KIF3AQ9Y496 STAG3L5P-204ENST00000443759 179 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 NDUFB4P10-201ENST00000452541 359 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 AP000870.1-201ENST00000472927 406 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.09□□□□□ -2.23
KIF3AQ9Y496 SNORD116-28-201ENST00000516123 91 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 MIR4438-201ENST00000585271 93 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 AC245008.1-201ENST00000608123 476 ntBASIC1.09□□□□□ -2.23
KIF3AQ9Y496 Y_RNA.179-201ENST00000363844 90 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.212-201ENST00000364177 102 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 RNU6-1080P-201ENST00000383982 107 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
KIF3AQ9Y496 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.08□□□□□ -2.24
KIF3AQ9Y496 MTATP6P13-201ENST00000438531 667 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 MTND4P18-201ENST00000447010 465 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 SNORD65B-201ENST00000459126 73 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 SNORA31.2-201ENST00000516019 134 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 RNU6-273P-201ENST00000516937 96 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 SNORA70.22-201ENST00000517160 124 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 AC091144.1-201ENST00000519573 138 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 AC004584.2-201ENST00000570407 410 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 AC124303.1-201ENST00000605703 360 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 AC073349.3-201ENST00000617616 186 ntBASIC1.08□□□□□ -2.24
KIF3AQ9Y496 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.135-201ENST00000363439 95 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 RNU6-1090P-201ENST00000364065 94 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.226-201ENST00000364337 114 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.530-201ENST00000384587 101 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 MIR660-201ENST00000385235 97 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 RNU2-16P-201ENST00000410712 136 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 RAB28P5-201ENST00000427490 651 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.07□□□□□ -2.24
KIF3AQ9Y496 RPS27P22-201ENST00000478056 241 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 TRBVA-201ENST00000498804 316 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 RNU6-107P-201ENST00000516643 102 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 AL513423.1-201ENST00000621695 132 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
KIF3AQ9Y496 RNY3P3-201ENST00000363816 102 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 RNU4-76P-201ENST00000364509 141 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.533-201ENST00000384596 114 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 MIR10B-201ENST00000385011 110 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 RNU6-910P-201ENST00000390844 107 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.06□□□□□ -2.24
KIF3AQ9Y496 AC010469.2-201ENST00000496412 480 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 APOOP3-201ENST00000536787 586 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.06□□□□□ -2.24
KIF3AQ9Y496 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.06□□□□□ -2.24
KIF3AQ9Y496 MIR3942-201ENST00000585264 109 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 NBR2-204ENST00000587322 63 ntBASIC1.06□□□□□ -2.24
KIF3AQ9Y496 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
KIF3AQ9Y496 RNU6-137P-201ENST00000363680 108 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.184-201ENST00000363884 108 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 RNU6-280P-201ENST00000364145 104 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 Y_RNA.414-201ENST00000384011 101 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AL355796.1-201ENST00000406706 323 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 RNA5SP247-201ENST00000411181 105 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 ZNF885P-201ENST00000420174 1098 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.05□□□□□ -2.24
KIF3AQ9Y496 MRPS10P1-201ENST00000448483 130 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AC098826.2-201ENST00000452011 651 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 RNU6-947P-201ENST00000516264 106 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AC136932.1-201ENST00000574771 208 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 MIR5696-201ENST00000578474 85 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AC136443.5-201ENST00000603741 370 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AC080078.2-201ENST00000603766 501 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AL513534.2-201ENST00000603836 250 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AF250324.2-201ENST00000608299 610 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 AC103591.3-201ENST00000608684 209 ntBASIC1.05□□□□□ -2.24
KIF3AQ9Y496 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
KIF3AQ9Y496 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms