Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AC021231.3-201ENST00000558497 370 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 UBL5P4-201ENST00000562584 236 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 MIR3136-201ENST00000583498 78 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AC240442.1-201ENST00000616055 283 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 SNORD98-201ENST00000636377 67 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 RNA5SP361-201ENST00000362686 118 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 snoU2_19.2-201ENST00000363024 80 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.319-201ENST00000365138 92 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.562-201ENST00000384695 113 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC012306.1-201ENST00000423267 114 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC139712.2-201ENST00000424302 339 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC027124.2-201ENST00000428249 105 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 HMGN2P3-201ENST00000433603 273 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 HMGN2P5-201ENST00000436882 273 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 RPL23AP7-203ENST00000449021 469 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 RPL26P26-201ENST00000480251 434 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 RNU6-1143P-201ENST00000516125 104 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 RNU6-1271P-201ENST00000517049 105 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 RNU6-794P-201ENST00000517261 64 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC022868.1-201ENST00000517767 391 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AP003733.2-201ENST00000529409 171 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC015712.3-201ENST00000559380 164 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 AC005520.5-201ENST00000613926 164 ntBASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
DDX43Q9NXZ2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 RNU6-379P-201ENST00000363813 104 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1318P-201ENST00000365389 103 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1026P-201ENST00000384465 108 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 MIR215-201ENST00000384858 110 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 MIR329-1-201ENST00000385028 80 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 MRPL35P1-201ENST00000404272 572 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 MIR1289-2-201ENST00000408360 111 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 RNA5SP450-201ENST00000411206 102 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 SRIP3-201ENST00000413200 219 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1132P-201ENST00000459214 107 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 AC007215.1-201ENST00000464893 276 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 SNORA40.15-201ENST00000516884 107 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 AC091144.1-201ENST00000519573 138 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 MIR4300-201ENST00000581016 96 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 AC011476.5-201ENST00000615594 130 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 AP001282.2-201ENST00000616149 309 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 AC137590.2-201ENST00000619709 240 ntBASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.15□□□□□ -2.07
DDX43Q9NXZ2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 AC010615.1-201ENST00000594254 1764 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.84-201ENST00000363011 104 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.447-201ENST00000384184 113 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1145P-201ENST00000384246 107 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RNU6-713P-201ENST00000384761 107 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 SNORD78.2-201ENST00000391076 69 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 MIR1262-201ENST00000408276 93 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RNA5SP201-201ENST00000410316 124 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1203P-201ENST00000410703 110 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RNU2-38P-201ENST00000410856 79 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RNU6-1001P-201ENST00000411265 100 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 AL590135.1-201ENST00000422215 156 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 AC019205.3-201ENST00000424573 156 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.638-201ENST00000459374 113 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RPS27P21-201ENST00000486977 252 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 RN7SKP49-201ENST00000516675 260 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 MIR4659A-201ENST00000580269 81 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 AC008555.8-201ENST00000623602 2168 ntBASIC2.14□□□□□ -2.07
DDX43Q9NXZ2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 LINC02555-201ENST00000563933 1951 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.14-201ENST00000362415 103 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 RNU4-15P-201ENST00000362613 141 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 SNORD115-3-201ENST00000363100 82 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 RNU4-56P-201ENST00000364700 142 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.288-201ENST00000364854 92 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 Y_RNA.439-201ENST00000384119 94 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 SNORD14D-201ENST00000384390 87 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 AL512604.1-201ENST00000404812 257 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 MIR1302-6-201ENST00000408466 90 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 AL445305.1-201ENST00000432577 575 ntBASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.13□□□□□ -2.07
DDX43Q9NXZ2 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 246 ms