Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 NDUFB4P10-201ENST00000452541 359 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 MTATP8P1-201ENST00000467115 207 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 MRPS35P2-201ENST00000508242 191 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 HMGB3P3-201ENST00000510526 400 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 RNU6-397P-201ENST00000516226 104 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.713-201ENST00000517013 96 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 AL117187.1-201ENST00000555482 181 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.772-201ENST00000606692 102 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 U3.8-201ENST00000363675 217 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 SNORA38-201ENST00000363946 132 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 SNORA67.1-201ENST00000364749 141 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-438P-201ENST00000365561 103 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.439-201ENST00000384119 94 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU1-148P-201ENST00000384472 162 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 AL358176.2-201ENST00000425769 204 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RAB28P5-201ENST00000427490 651 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-625P-201ENST00000459412 107 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-408P-201ENST00000515910 100 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-897P-201ENST00000517135 105 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 CYCSP26-201ENST00000534107 320 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 MIR4753-201ENST00000585119 83 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 MIR410-201ENST00000362222 80 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.152-201ENST00000363578 100 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.183-201ENST00000363882 113 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.214-201ENST00000364201 112 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 RNU6-1264P-201ENST00000383891 107 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 RNU6-975P-201ENST00000384296 105 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.498-201ENST00000384460 102 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 MIR548B-201ENST00000385247 97 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 RPL21P1-201ENST00000399532 476 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC123900.1-201ENST00000420390 96 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC114982.1-201ENST00000469402 321 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AP002001.1-203ENST00000534002 267 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AL109918.3-201ENST00000603072 338 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC025754.2-201ENST00000606491 432 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 MIR340-201ENST00000362125 95 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 RNU6-20P-201ENST00000384106 107 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 RNU6-1105P-201ENST00000384774 107 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 U8.13-201ENST00000390842 128 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 MIR1262-201ENST00000408276 93 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 ELOCP20-201ENST00000422460 345 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC005002.2-201ENST00000438228 269 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC010531.2-201ENST00000465012 153 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 RNU6-107P-201ENST00000516643 102 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC136932.1-201ENST00000574771 208 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 PRR13P7-201ENST00000605538 430 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AL162730.1-201ENST00000605734 292 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.99-201ENST00000363138 105 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-1309P-201ENST00000363305 108 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-626P-201ENST00000363354 107 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.133-201ENST00000363428 110 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.143-201ENST00000363520 106 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-1109P-201ENST00000391187 107 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 TOMM22P2-201ENST00000430735 237 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 MTCO1P44-201ENST00000441935 243 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC074290.1-201ENST00000448883 135 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU7-57P-201ENST00000459540 60 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 HMGN1P10-201ENST00000474557 553 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-635P-201ENST00000516651 102 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 SNORA40.15-201ENST00000516884 107 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC055872.1-201ENST00000570978 278 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 MIR4423-201ENST00000580922 80 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 MIR6840-201ENST00000611937 71 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC130454.1-201ENST00000622948 401 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms