Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 NDUFB4P10-201ENST00000452541 359 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 AL137159.1-201ENST00000452808 512 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 MTATP8P1-201ENST00000467115 207 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 MRPS35P2-201ENST00000508242 191 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 HMGB3P3-201ENST00000510526 400 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 RNU6-397P-201ENST00000516226 104 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.713-201ENST00000517013 96 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 AL117187.1-201ENST00000555482 181 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.772-201ENST00000606692 102 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 U3.8-201ENST00000363675 217 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 SNORA38-201ENST00000363946 132 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 SNORA67.1-201ENST00000364749 141 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-438P-201ENST00000365561 103 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.439-201ENST00000384119 94 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU1-148P-201ENST00000384472 162 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 AL358176.2-201ENST00000425769 204 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RAB28P5-201ENST00000427490 651 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-625P-201ENST00000459412 107 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-408P-201ENST00000515910 100 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 RNU6-897P-201ENST00000517135 105 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 CYCSP26-201ENST00000534107 320 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 MIR4753-201ENST00000585119 83 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.9□□□□□ -2.11
SIX2Q9NPC8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SIX2Q9NPC8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 MIR410-201ENST00000362222 80 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.152-201ENST00000363578 100 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.183-201ENST00000363882 113 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.214-201ENST00000364201 112 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 RNU6-1264P-201ENST00000383891 107 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 RNU6-975P-201ENST00000384296 105 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.498-201ENST00000384460 102 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 MIR548B-201ENST00000385247 97 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 RPL21P1-201ENST00000399532 476 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC123900.1-201ENST00000420390 96 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC114982.1-201ENST00000469402 321 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AP002001.1-203ENST00000534002 267 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AL109918.3-201ENST00000603072 338 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 AC025754.2-201ENST00000606491 432 ntBASIC1.89□□□□□ -2.11
SIX2Q9NPC8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 MIR340-201ENST00000362125 95 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 RNU6-20P-201ENST00000384106 107 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 RNU6-1105P-201ENST00000384774 107 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 U8.13-201ENST00000390842 128 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 MIR1262-201ENST00000408276 93 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 ELOCP20-201ENST00000422460 345 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC005002.2-201ENST00000438228 269 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC010531.2-201ENST00000465012 153 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 RNU6-107P-201ENST00000516643 102 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AC136932.1-201ENST00000574771 208 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 PRR13P7-201ENST00000605538 430 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 AL162730.1-201ENST00000605734 292 ntBASIC1.88□□□□□ -2.11
SIX2Q9NPC8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SIX2Q9NPC8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.99-201ENST00000363138 105 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-1309P-201ENST00000363305 108 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-626P-201ENST00000363354 107 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.133-201ENST00000363428 110 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 Y_RNA.143-201ENST00000363520 106 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-1109P-201ENST00000391187 107 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 SNORA40.18-201ENST00000391200 128 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 TOMM22P2-201ENST00000430735 237 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 MTCO1P44-201ENST00000441935 243 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC074290.1-201ENST00000448883 135 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU7-57P-201ENST00000459540 60 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 HMGN1P10-201ENST00000474557 553 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 RNU6-635P-201ENST00000516651 102 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 SNORA40.15-201ENST00000516884 107 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC055872.1-201ENST00000570978 278 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 MIR4423-201ENST00000580922 80 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
SIX2Q9NPC8 MIR6840-201ENST00000611937 71 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.87□□□□□ -2.11
SIX2Q9NPC8 AC130454.1-201ENST00000622948 401 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms