Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AC011604.1-201ENST00000545978 196 ntBASIC0.65□□□□□ -2.31
BPIFA3Q9BQP9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.65□□□□□ -2.31
BPIFA3Q9BQP9 AC136443.5-201ENST00000603741 370 ntBASIC0.65□□□□□ -2.31
BPIFA3Q9BQP9 AC012557.2-201ENST00000605919 418 ntBASIC0.65□□□□□ -2.31
BPIFA3Q9BQP9 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
BPIFA3Q9BQP9 MIR6504-201ENST00000613520 61 ntBASIC0.65□□□□□ -2.31
BPIFA3Q9BQP9 MTND4P12-201ENST00000498999 1377 ntBASIC0.65□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.100-201ENST00000363141 102 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 SNORD113-7-201ENST00000363762 77 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-793P-201ENST00000384233 104 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.481-201ENST00000384373 102 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 U8.16-201ENST00000391279 133 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 CALM2P4-201ENST00000430810 426 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 MTND4P18-201ENST00000447010 465 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 RN7SKP298-201ENST00000515950 94 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 RPL21P9-201ENST00000556149 474 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 PIGPP4-201ENST00000584447 307 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 AC004832.4-201ENST00000608952 331 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 MIR8070-201ENST00000616510 88 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 AL391262.2-201ENST00000622466 494 ntBASIC0.64□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.167-201ENST00000363735 109 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-873P-201ENST00000363833 107 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-1322P-201ENST00000364309 107 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 SNORA25.9-201ENST00000365087 128 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.415-201ENST00000384012 112 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 SNORD116-13-201ENST00000384408 92 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-159P-201ENST00000391080 106 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 RPEP5-201ENST00000441137 268 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 RPS27P22-201ENST00000478056 241 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 OR9P1P-201ENST00000496431 281 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 DEFB108E-201ENST00000524692 240 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 AC104383.1-201ENST00000530297 370 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 AC027288.2-201ENST00000553028 243 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 MIR3684-201ENST00000579779 74 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 FAM157A-202ENST00000615155 405 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 AL158209.2-201ENST00000619266 216 ntBASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.381-201ENST00000365666 102 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-541P-201ENST00000384709 110 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 RNA5SP482-201ENST00000391269 118 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 AC245047.8-201ENST00000456455 284 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 AC010469.2-201ENST00000496412 480 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 MTCO2P30-201ENST00000503662 364 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 RNU7-12P-201ENST00000516030 62 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 RNU2-56P-201ENST00000516826 190 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-341P-201ENST00000516973 96 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 FAM106DP-201ENST00000586416 501 ntBASIC0.62□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.179-201ENST00000363844 90 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 RNU4-20P-201ENST00000365601 151 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 SNORA69-201ENST00000383895 132 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 SNORA75-201ENST00000384158 137 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-790P-201ENST00000384479 105 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 MIR514A2-201ENST00000385131 88 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 MIR514A3-201ENST00000385132 88 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 MTND3P16-201ENST00000452205 344 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 AL049830.1-201ENST00000468034 425 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 AC091179.3-201ENST00000474761 144 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 AC093303.1-201ENST00000514549 295 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.695-201ENST00000516715 107 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 MTATP6P24-201ENST00000576835 677 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 AC073114.1-201ENST00000612027 490 ntBASIC0.61□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.164-201ENST00000363709 102 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 Y_RNA.184-201ENST00000363884 108 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-17P-201ENST00000384245 107 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-18P-201ENST00000384527 107 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 RNU4-55P-201ENST00000410731 137 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 Z82188.1-201ENST00000436709 154 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 PCMTD1P1-201ENST00000455560 355 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AC097462.1-201ENST00000514125 324 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 RNU7-172P-201ENST00000517125 64 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AP002004.2-201ENST00000531656 154 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AC023157.2-201ENST00000540596 141 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AC025627.3-201ENST00000582078 182 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 7SK.7-201ENST00000603504 247 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 AL391903.3-201ENST00000612158 163 ntBASIC0.6□□□□□ -2.31
BPIFA3Q9BQP9 RNU6-727P-201ENST00000363592 107 ntBASIC0.59□□□□□ -2.31
BPIFA3Q9BQP9 SNORD114-22-201ENST00000365423 72 ntBASIC0.59□□□□□ -2.31
BPIFA3Q9BQP9 MIR605-201ENST00000385078 83 ntBASIC0.59□□□□□ -2.31
BPIFA3Q9BQP9 SNORA75.2-201ENST00000391138 150 ntBASIC0.59□□□□□ -2.31
BPIFA3Q9BQP9 SNORA75.3-201ENST00000391231 150 ntBASIC0.59□□□□□ -2.31
BPIFA3Q9BQP9 DAP3P1-201ENST00000441522 278 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 235.3 ms