Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-306P-201ENST00000384617 107 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 MIR320A-201ENST00000385302 82 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 MIR548J-201ENST00000408833 112 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 MTATP6P13-201ENST00000438531 667 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 AC069257.2-201ENST00000441819 155 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.13□□□□□ -2.23
FOXC2Q99958 AC046134.1-201ENST00000514454 666 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 RNU6-1041P-201ENST00000516254 102 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 Y_RNA.682-201ENST00000516457 100 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 RNA5SP54-201ENST00000516951 92 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 RRN3P3-201ENST00000549207 578 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.13□□□□□ -2.23
FOXC2Q99958 AL160236.1-201ENST00000556317 195 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.13□□□□□ -2.23
FOXC2Q99958 MIR5006-201ENST00000583027 110 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 AC080078.3-201ENST00000605407 463 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 AC008873.1-201ENST00000625051 138 ntBASIC1.13□□□□□ -2.23
FOXC2Q99958 Y_RNA.166-201ENST00000363730 102 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 RNU6-1080P-201ENST00000383982 107 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 Y_RNA.533-201ENST00000384596 114 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 MIR586-201ENST00000385035 97 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 RNU6-159P-201ENST00000391080 106 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXC2Q99958 AC060773.1-201ENST00000421698 310 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 RPS27P16-201ENST00000425758 201 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 AL135790.2-201ENST00000437701 267 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 RBMX2P4-201ENST00000441256 376 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXC2Q99958 AC018710.1-201ENST00000506509 158 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.12□□□□□ -2.23
FOXC2Q99958 RNU2-34P-201ENST00000516534 121 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXC2Q99958 AK6P2-201ENST00000549020 471 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXC2Q99958 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXC2Q99958 AC015688.6-201ENST00000577737 104 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 SNRPGP20-201ENST00000604477 205 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 AC018462.2-201ENST00000605375 395 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 AL353149.1-201ENST00000610667 244 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.12□□□□□ -2.23
FOXC2Q99958 U6atac.1-201ENST00000616025 117 ntBASIC1.12□□□□□ -2.23
FOXC2Q99958 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.12□□□□□ -2.23
FOXC2Q99958 ZNF204P-201ENST00000416749 2397 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 ZNF299P-201ENST00000406845 1804 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RNU6-418P-201ENST00000384035 107 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RNU6-203P-201ENST00000384038 104 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 Y_RNA.490-201ENST00000384413 102 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RNU6-1235P-201ENST00000384559 107 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 MIR32-201ENST00000384965 70 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 MIR153-2-201ENST00000385225 87 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 CST2P1-201ENST00000425770 87 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.11□□□□□ -2.23
FOXC2Q99958 MTND1P2-201ENST00000430604 821 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.11□□□□□ -2.23
FOXC2Q99958 RNU6-498P-201ENST00000459468 107 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 AC011406.1-201ENST00000512440 370 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 Y_RNA.691-201ENST00000516611 103 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RNA5SP384-201ENST00000516615 116 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RNU6-1198P-201ENST00000516904 67 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RNU6-273P-201ENST00000516937 96 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 RAB11AP2-201ENST00000545905 639 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 MIR4790-201ENST00000577799 79 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 AC073413.2-201ENST00000604332 360 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 MIR6128-201ENST00000615528 109 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 AL078604.3-201ENST00000615580 211 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 AC022306.2-201ENST00000617563 647 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 AL359697.1-201ENST00000624879 587 ntBASIC1.11□□□□□ -2.23
FOXC2Q99958 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.11□□□□□ -2.23
FOXC2Q99958 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
FOXC2Q99958 MTND4P12-201ENST00000498999 1377 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
FOXC2Q99958 RNU6-845P-201ENST00000362578 103 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 RNU6-593P-201ENST00000364716 112 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 Y_RNA.374-201ENST00000365606 101 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 Y_RNA.393-201ENST00000383936 102 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 RNU6-767P-201ENST00000384132 107 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 MIR194-1-201ENST00000384892 85 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 MT-TL1-201ENST00000386347 75 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 PDCL2P1-201ENST00000419302 352 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 RPS3AP52-201ENST00000435639 297 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.1□□□□□ -2.23
FOXC2Q99958 NDUFB4P10-201ENST00000452541 359 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 AC004223.1-201ENST00000479840 271 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 AC116353.2-201ENST00000505332 712 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 RNU6-948P-201ENST00000516374 107 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 CBX3P8-201ENST00000532412 525 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.1□□□□□ -2.23
FOXC2Q99958 AC005014.2-201ENST00000607795 599 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 MIR7974-201ENST00000615835 79 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 AC126177.8-201ENST00000618339 1015 ntBASIC1.1□□□□□ -2.23
FOXC2Q99958 CASC19-280ENST00000642102 1351 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 Y_RNA.88-201ENST00000363029 99 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 Y_RNA.184-201ENST00000363884 108 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 362.8 ms