Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 Y_RNA.415-201ENST00000384012 112 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 RNU6-245P-201ENST00000384020 107 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 Y_RNA.481-201ENST00000384373 102 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 MIR19B1-201ENST00000384829 87 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 MIR499A-201ENST00000384903 122 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 MIR32-201ENST00000384965 70 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
ZNF140P52738 AL590002.1-201ENST00000406554 418 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 RNU2-64P-201ENST00000411315 191 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.62□□□□□ -2.31
ZNF140P52738 NDUFA5P4-201ENST00000436704 385 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 RPS4XP11-201ENST00000446897 772 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 RPL39P38-201ENST00000467018 153 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AC091179.3-201ENST00000474761 144 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.62□□□□□ -2.31
ZNF140P52738 RN7SKP49-201ENST00000516675 260 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AL512360.1-201ENST00000555346 234 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 UBL5P4-201ENST00000562584 236 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.62□□□□□ -2.31
ZNF140P52738 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 MIR5696-201ENST00000578474 85 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 U6.73-201ENST00000619194 103 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 AL359697.1-201ENST00000624879 587 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF140P52738 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.62□□□□□ -2.31
ZNF140P52738 AC008163.1-202ENST00000636004 2889 ntBASIC0.62□□□□□ -2.31
ZNF140P52738 RNU6-128P-201ENST00000383976 107 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 RNU6-17P-201ENST00000384245 107 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 RNU6-505P-201ENST00000384427 107 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 RNU6-18P-201ENST00000384527 107 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
ZNF140P52738 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.61□□□□□ -2.31
ZNF140P52738 AC243428.1-201ENST00000421099 264 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.61□□□□□ -2.31
ZNF140P52738 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.61□□□□□ -2.31
ZNF140P52738 MTATP6P17-201ENST00000431030 672 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.61□□□□□ -2.31
ZNF140P52738 NDUFB4P10-201ENST00000452541 359 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.61□□□□□ -2.31
ZNF140P52738 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.61□□□□□ -2.31
ZNF140P52738 RNU6-1146P-201ENST00000516282 102 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 ZNF519P2-201ENST00000557032 169 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 SNORD11B-201ENST00000607707 90 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 MIR6788-201ENST00000618842 66 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 AC009248.2-201ENST00000619826 254 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.61□□□□□ -2.31
ZNF140P52738 U3.8-201ENST00000363675 217 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 RNU6-137P-201ENST00000363680 108 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 RNY3P3-201ENST00000363816 102 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 Y_RNA.212-201ENST00000364177 102 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 Y_RNA.319-201ENST00000365138 92 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 SNORD41-201ENST00000386967 70 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
ZNF140P52738 RNU6-440P-201ENST00000390882 105 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 RNU6-159P-201ENST00000391080 106 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 MIR548J-201ENST00000408833 112 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF140P52738 RAB28P5-201ENST00000427490 651 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.6□□□□□ -2.31
ZNF140P52738 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.6□□□□□ -2.31
ZNF140P52738 SNORA25.14-201ENST00000516481 132 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 RNU6-256P-201ENST00000516747 97 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 RNA5SP54-201ENST00000516951 92 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 AC004584.2-201ENST00000570407 410 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 MIR3942-201ENST00000585264 109 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 POLR3GP2-201ENST00000588366 668 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 AL359075.3-201ENST00000613288 217 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 AC099654.12-201ENST00000639868 649 ntBASIC0.6□□□□□ -2.31
ZNF140P52738 RNU6-727P-201ENST00000363592 107 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 RNU4-9P-201ENST00000364951 139 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 Y_RNA.373-201ENST00000365600 103 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 MIR517A-201ENST00000385001 87 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 MIR10B-201ENST00000385011 110 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 MRPL42P3-201ENST00000401492 326 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 RNU2-16P-201ENST00000410712 136 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 AC008134.1-201ENST00000420943 193 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 AC245047.3-201ENST00000429428 127 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 SEPT14P3-201ENST00000439401 183 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 AL732372.2-207ENST00000445840 183 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 MTCO2P7-201ENST00000446518 666 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 SEPT14P2-201ENST00000453405 183 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 SNORD65B-201ENST00000459126 73 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 AC107401.1-201ENST00000503426 685 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 SEPT14P4-201ENST00000513445 186 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 SNORA31.2-201ENST00000516019 134 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 SNORA31.4-201ENST00000516049 129 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 RNU6-1281P-201ENST00000516223 105 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 RNU1-142P-201ENST00000516682 145 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 AC091144.1-201ENST00000519573 138 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 FO082796.1-201ENST00000523795 183 ntBASIC0.59□□□□□ -2.31
ZNF140P52738 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.59□□□□□ -2.31
ZNF140P52738 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms