Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR4753-201ENST00000585119 83 ntBASIC1□□□□□ -2.25
SCN4AP35499 AP001485.1-201ENST00000604799 199 ntBASIC1□□□□□ -2.25
SCN4AP35499 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1□□□□□ -2.25
SCN4AP35499 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1□□□□□ -2.25
SCN4AP35499 AC100821.1-201ENST00000523153 2479 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MIR340-201ENST00000362125 95 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 RNU6-873P-201ENST00000363833 107 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 Y_RNA.179-201ENST00000363844 90 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 RNU6-534P-201ENST00000364877 106 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 RNU6-596P-201ENST00000365395 98 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 RNU4-20P-201ENST00000365601 151 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MIR1185-2-201ENST00000408687 86 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MTND3P23-201ENST00000431980 347 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.99□□□□□ -2.25
SCN4AP35499 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.99□□□□□ -2.25
SCN4AP35499 MTCO1P29-201ENST00000496868 288 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.99□□□□□ -2.25
SCN4AP35499 RNU1-142P-201ENST00000516682 145 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.99□□□□□ -2.25
SCN4AP35499 AC243960.4-201ENST00000600532 288 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC093783.1-201ENST00000612976 329 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SCN4AP35499 Y_RNA.89-201ENST00000363031 102 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 RNU1-96P-201ENST00000364163 162 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 RNU6-1026P-201ENST00000384465 108 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MIR514A2-201ENST00000385131 88 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MIR514A3-201ENST00000385132 88 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SCN4AP35499 FCF1P9-201ENST00000412546 282 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MTATP6P13-201ENST00000438531 667 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 DAP3P1-201ENST00000441522 278 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC073910.1-201ENST00000445047 438 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 HMGN1P13-201ENST00000505795 138 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 RNVU1-2-201ENST00000516326 135 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.99□□□□□ -2.25
SCN4AP35499 EIF1P4-201ENST00000572664 335 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MIR4422-201ENST00000581938 83 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC091178.2-201ENST00000584401 117 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC069114.2-201ENST00000604699 304 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC124303.1-201ENST00000605703 360 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC104260.1-201ENST00000616660 539 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC009033.1-201ENST00000624279 431 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AL359697.1-201ENST00000624879 587 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 AC068205.3-201ENST00000636385 468 ntBASIC0.99□□□□□ -2.25
SCN4AP35499 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.98□□□□□ -2.25
SCN4AP35499 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SCN4AP35499 RNU6-845P-201ENST00000362578 103 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 RNU6-281P-201ENST00000384212 103 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 Y_RNA.559-201ENST00000384686 107 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 MIR521-1-201ENST00000384902 87 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 MIR10B-201ENST00000385011 110 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 MIR30A-201ENST00000385092 71 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 RN7SKP200-201ENST00000410564 320 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.98□□□□□ -2.25
SCN4AP35499 AC016717.1-201ENST00000448918 286 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.98□□□□□ -2.25
SCN4AP35499 HMGN2P9-201ENST00000476875 229 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 RPL17P19-201ENST00000489069 552 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.98□□□□□ -2.25
SCN4AP35499 AC067942.3-201ENST00000512025 362 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 RNU4-49P-201ENST00000516080 140 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 RNU6-864P-201ENST00000516256 108 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 RNU6-835P-201ENST00000516974 104 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 MTND1P5-201ENST00000517906 940 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 AC005899.2-201ENST00000584353 90 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 AL138726.1-201ENST00000614873 333 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 FAM157A-202ENST00000615155 405 ntBASIC0.98□□□□□ -2.25
SCN4AP35499 RNY1P16-201ENST00000363063 111 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 RNU5F-3P-201ENST00000363767 117 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 SNORA63D-201ENST00000364359 132 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 MIR520A-201ENST00000384862 85 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 MIR597-201ENST00000384968 97 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 USP9YP28-201ENST00000435142 589 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 Z82188.1-201ENST00000436709 154 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 NFU1P2-201ENST00000448700 469 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 RNU7-175P-201ENST00000515915 61 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 RNA5SP121-201ENST00000516537 101 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 RNU7-30P-201ENST00000516835 62 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 SUMO2P16-201ENST00000519475 264 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.97□□□□□ -2.25
SCN4AP35499 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.97□□□□□ -2.25
SCN4AP35499 AC133485.1-201ENST00000567176 124 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 AC138907.6-201ENST00000568401 126 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 MIR4711-201ENST00000578274 70 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 MIR4273-201ENST00000582824 84 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 AL355802.3-201ENST00000607571 545 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.97□□□□□ -2.25
SCN4AP35499 AC002553.4-201ENST00000616896 331 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 AL121890.5-201ENST00000620848 304 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 snoZ196.1-201ENST00000625269 89 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 AC010615.1-201ENST00000594254 1764 ntBASIC0.97□□□□□ -2.25
SCN4AP35499 RNU6-23P-201ENST00000363283 107 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 SNORD115-32-201ENST00000364079 82 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 Y_RNA.212-201ENST00000364177 102 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 RNU6-939P-201ENST00000384634 107 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 RNA5SP193-201ENST00000410353 107 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 AL358176.2-201ENST00000425769 204 ntBASIC0.96□□□□□ -2.26
SCN4AP35499 MTCO3P29-201ENST00000432119 779 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms