Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 FAM71BP1-201ENST00000604431 523 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORA28-201ENST00000606769 126 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 AL158063.1-201ENST00000615349 536 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 MTND4P12-201ENST00000498999 1377 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU4-9P-201ENST00000364951 139 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 Z82188.1-201ENST00000436709 154 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-917P-201ENST00000516294 104 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORA25.14-201ENST00000516481 132 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 AC027288.2-201ENST00000553028 243 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.74□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-137P-201ENST00000363680 108 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORA69-201ENST00000383895 132 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-424P-201ENST00000384367 105 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR32-201ENST00000384965 70 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 CALM2P3-201ENST00000400429 449 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU4-55P-201ENST00000410731 137 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 STAG3L5P-204ENST00000443759 179 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 MTND3P16-201ENST00000452205 344 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 RN7SKP298-201ENST00000515950 94 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 AL158209.2-201ENST00000619266 216 ntBASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CCNB1IP1Q9NPC3 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 Y_RNA.100-201ENST00000363141 102 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-873P-201ENST00000363833 107 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-522P-201ENST00000364497 107 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 Y_RNA.319-201ENST00000365138 92 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORA2.2-201ENST00000365473 135 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AL451046.2-201ENST00000403074 277 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AL590002.1-201ENST00000406554 418 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AC092447.3-201ENST00000426027 686 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 MTCO3P18-201ENST00000440206 761 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 MRPS10P1-201ENST00000448483 130 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 TPT1P7-201ENST00000458300 517 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-956P-201ENST00000458868 103 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 Y_RNA.717-201ENST00000517106 92 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AC026371.1-201ENST00000551867 419 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR4438-201ENST00000585271 93 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AL357312.1-201ENST00000603879 298 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 Z69908.1-201ENST00000622603 247 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 AC006435.5-201ENST00000624486 112 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-1322P-201ENST00000364309 107 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 MIR153-2-201ENST00000385225 87 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AL355796.1-201ENST00000406706 323 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU6-648P-201ENST00000410190 107 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AL353572.1-201ENST00000442490 417 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU7-187P-201ENST00000458985 68 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 SNORD65B-201ENST00000459126 73 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AC091179.3-201ENST00000474761 144 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU6-322P-201ENST00000516010 103 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU6-835P-201ENST00000516974 104 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 AC006504.8-201ENST00000621046 635 ntBASIC0.71□□□□□ -2.3
CCNB1IP1Q9NPC3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 Y_RNA.582-201ENST00000391023 95 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 CALM2P4-201ENST00000430810 426 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 MTCO2P30-201ENST00000503662 364 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 AC022493.2-201ENST00000506122 481 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU6-947P-201ENST00000516264 106 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 APOOP3-201ENST00000536787 586 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 MIR3973-201ENST00000579824 107 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 MIR6079-201ENST00000635807 62 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 AC008163.1-202ENST00000636004 2889 ntBASIC0.7□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU6-128P-201ENST00000383976 107 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU6-159P-201ENST00000391080 106 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 U8.16-201ENST00000391279 133 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 MTND5P15-201ENST00000434246 349 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 MTND4P18-201ENST00000447010 465 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 RPL39P39-201ENST00000455840 151 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 RNU7-21P-201ENST00000459430 62 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 OR9P1P-201ENST00000496431 281 ntBASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.69□□□□□ -2.3
CCNB1IP1Q9NPC3 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms