Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 BX322639.1-202ENST00000423987 2213 ntBASIC2.26□□□□□ -2.05
PKP4Q99569 ZNF204P-201ENST00000416749 2397 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.25□□□□□ -2.05
PKP4Q99569 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PKP4Q99569 SNORD113-8-201ENST00000363497 74 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 RNU6-1210P-201ENST00000363775 107 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 Y_RNA.237-201ENST00000364439 102 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 SNORA20.1-201ENST00000364790 130 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
PKP4Q99569 RNU6-245P-201ENST00000384020 107 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 RNU6-301P-201ENST00000384277 107 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 Y_RNA.477-201ENST00000384352 108 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 CBX3P9-201ENST00000402326 552 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 MIR548H3-201ENST00000408771 118 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 Y_RNA.595-201ENST00000410403 105 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 RNA5SP508-201ENST00000411327 119 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.25□□□□□ -2.05
PKP4Q99569 MTND4LP30-201ENST00000454092 297 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 RPL26P26-201ENST00000480251 434 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.25□□□□□ -2.05
PKP4Q99569 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.25□□□□□ -2.05
PKP4Q99569 MTND1P19-201ENST00000511780 315 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 SNORA25.14-201ENST00000516481 132 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 RNA5SP402-201ENST00000517148 110 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 CYCSP23-201ENST00000519781 313 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 AC078938.1-201ENST00000620993 318 ntBASIC2.25□□□□□ -2.05
PKP4Q99569 Y_RNA.60-201ENST00000362831 98 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 RNU6-655P-201ENST00000362858 107 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 SNORA25B-201ENST00000365507 128 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 MIR320B2-201ENST00000408479 138 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 Y_RNA.602-201ENST00000410535 92 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 RNU5A-5P-201ENST00000411054 116 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.24□□□□□ -2.05
PKP4Q99569 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.24□□□□□ -2.05
PKP4Q99569 AC018634.1-201ENST00000437554 401 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.24□□□□□ -2.05
PKP4Q99569 AC010095.1-201ENST00000443543 144 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 AC007395.1-201ENST00000451333 677 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 AL121594.1-201ENST00000475906 575 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 AC107222.1-201ENST00000510899 637 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 SNORA40.9-201ENST00000515895 93 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 RNU6-496P-201ENST00000516145 99 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 RNU6-1338P-201ENST00000516328 91 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 RNA5SP281-201ENST00000516504 135 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 Y_RNA.683-201ENST00000516508 93 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 RNU6-586P-201ENST00000517265 104 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 DEFB108E-201ENST00000524692 240 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 NDUFA5P6-201ENST00000542110 379 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.24□□□□□ -2.05
PKP4Q99569 AK6P2-201ENST00000549020 471 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 MIR4529-201ENST00000578110 78 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 SNRPGP20-201ENST00000604477 205 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.24□□□□□ -2.05
PKP4Q99569 AC141273.2-201ENST00000618989 130 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.24□□□□□ -2.05
PKP4Q99569 Y_RNA.179-201ENST00000363844 90 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 Y_RNA.416-201ENST00000384014 113 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 RNU6-378P-201ENST00000384324 107 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 Y_RNA.541-201ENST00000384640 113 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 RNA5SP201-201ENST00000410316 124 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.23□□□□□ -2.05
PKP4Q99569 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 SEPT14P8-201ENST00000508026 178 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 Y_RNA.673-201ENST00000516306 88 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 MIR4423-201ENST00000580922 80 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 SNORD113-5-201ENST00000607261 78 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 PCGEM1.1-201ENST00000613431 131 ntBASIC2.23□□□□□ -2.05
PKP4Q99569 MTND5P35-201ENST00000557537 1720 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 ZNF658B-202ENST00000615961 3375 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PKP4Q99569 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PKP4Q99569 Y_RNA.20-201ENST00000362479 113 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 RNU4-15P-201ENST00000362613 141 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 RNU4-90P-201ENST00000362773 141 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 RNU6-626P-201ENST00000363354 107 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 Y_RNA.230-201ENST00000364348 109 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 RNU6-290P-201ENST00000365212 101 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 Y_RNA.352-201ENST00000365439 102 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 RNU6-793P-201ENST00000384233 104 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 SNORA40.19-201ENST00000390846 128 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AL390729.2-201ENST00000416137 156 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.22□□□□□ -2.05
PKP4Q99569 AC018868.1-201ENST00000491307 315 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
PKP4Q99569 AC074133.1-201ENST00000515696 183 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.22□□□□□ -2.05
PKP4Q99569 EIF4A1P12-201ENST00000551910 141 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AC026470.2-201ENST00000561492 181 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AC233702.2-202ENST00000562547 291 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AL442067.1-201ENST00000613261 223 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AL357075.2-201ENST00000614906 189 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.22□□□□□ -2.05
PKP4Q99569 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
PKP4Q99569 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.22□□□□□ -2.05
PKP4Q99569 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.21□□□□□ -2.05
PKP4Q99569 Y_RNA.16-201ENST00000362421 102 ntBASIC2.21□□□□□ -2.06
PKP4Q99569 RNU1-62P-201ENST00000362599 164 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms