Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR1252-201ENST00000408861 65 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 RAB28P5-201ENST00000427490 651 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 RNU6-107P-201ENST00000516643 102 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 DEFB122-202ENST00000569013 197 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 AC113195.1-201ENST00000579952 141 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 AC245884.12-201ENST00000615364 59 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 snoZ196.1-201ENST00000625269 89 ntBASIC2.32□□□□□ -2.04
HMGB4Q8WW32 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB4Q8WW32 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HMGB4Q8WW32 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HMGB4Q8WW32 SNORD114-6-201ENST00000364393 72 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 RNU6-160P-201ENST00000384591 107 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 HMGN2P39-201ENST00000398005 273 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 MIR1185-2-201ENST00000408687 86 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AC113618.1-201ENST00000416747 285 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGB4Q8WW32 RNU1-131P-201ENST00000458943 161 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 U8.20-201ENST00000459445 131 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGB4Q8WW32 RNU6-764P-201ENST00000516396 105 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AP002001.1-203ENST00000534002 267 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AC015712.3-201ENST00000559380 164 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AL109918.3-201ENST00000603072 338 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.31□□□□□ -2.04
HMGB4Q8WW32 AL021879.1-201ENST00000611756 288 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 PART1_1.1-201ENST00000611761 217 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGB4Q8WW32 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGB4Q8WW32 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 FO624990.1-201ENST00000636373 85 ntBASIC2.31□□□□□ -2.04
HMGB4Q8WW32 SNORD115-3-201ENST00000363100 82 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 SNORA63C-201ENST00000364578 129 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.380-201ENST00000365663 111 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 AL079342.1-201ENST00000401460 267 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 RNA5SP181-201ENST00000410246 98 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 RNU6-130P-201ENST00000411112 103 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 TOMM22P2-201ENST00000430735 237 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGB4Q8WW32 RNU6-856P-201ENST00000516959 98 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGB4Q8WW32 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGB4Q8WW32 MIR5007-201ENST00000583098 95 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.772-201ENST00000606692 102 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.3□□□□□ -2.04
HMGB4Q8WW32 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 RNU6-738P-201ENST00000384531 106 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 SNORA64-201ENST00000384674 134 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 SNORA40.19-201ENST00000390846 128 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 RNU6-57P-201ENST00000411348 103 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.29□□□□□ -2.04
HMGB4Q8WW32 RNU6-221P-201ENST00000459541 99 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.29□□□□□ -2.04
HMGB4Q8WW32 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGB4Q8WW32 AL355297.3-201ENST00000604082 446 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 AL137847.3-201ENST00000611521 109 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 MIR3674-201ENST00000636576 68 ntBASIC2.29□□□□□ -2.04
HMGB4Q8WW32 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMGB4Q8WW32 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB4Q8WW32 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.153-201ENST00000363615 91 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.439-201ENST00000384119 94 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 MIR518A2-201ENST00000384966 87 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 MIR221-201ENST00000385135 110 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 BX510359.4-201ENST00000423750 193 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGB4Q8WW32 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 Y_RNA.713-201ENST00000517013 96 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 SNORA31.25-201ENST00000517242 134 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 RAC1P9-201ENST00000604990 392 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 AL590240.4-201ENST00000616908 390 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGB4Q8WW32 AC130454.1-201ENST00000622948 401 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 AC010297.1-201ENST00000623948 149 ntBASIC2.28□□□□□ -2.04
HMGB4Q8WW32 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB4Q8WW32 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMGB4Q8WW32 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
HMGB4Q8WW32 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
HMGB4Q8WW32 RNU1-58P-201ENST00000362413 163 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 RNU6-626P-201ENST00000363354 107 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 RNA5SP493-201ENST00000364115 91 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 RNU6-20P-201ENST00000384106 107 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 RNU6-1310P-201ENST00000384153 107 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 SNORA11.4-201ENST00000408823 129 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 RNA5SP475-201ENST00000410568 110 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 AC005002.2-201ENST00000438228 269 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 AC073910.1-201ENST00000445047 438 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 SNORA31.15-201ENST00000516771 132 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.27□□□□□ -2.05
HMGB4Q8WW32 AC055872.1-201ENST00000570978 278 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 MIR3169-201ENST00000578032 83 ntBASIC2.27□□□□□ -2.05
HMGB4Q8WW32 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HMGB4Q8WW32 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.27□□□□□ -2.05
HMGB4Q8WW32 MIR6073-201ENST00000352083 89 ntBASIC2.26□□□□□ -2.05
HMGB4Q8WW32 RNU6-454P-201ENST00000364292 107 ntBASIC2.26□□□□□ -2.05
HMGB4Q8WW32 Y_RNA.230-201ENST00000364348 109 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms