Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 USMG5P1-201ENST00000425964 177 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.86□□□□□ -2.11
RAPH1Q70E73 AC010409.1-201ENST00000487382 476 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 RNU6-567P-201ENST00000516746 107 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 RNU6-264P-201ENST00000517134 104 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 SNORD116.3-201ENST00000517176 78 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 AC016256.1-201ENST00000547971 354 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 EIF4A1P12-201ENST00000551910 141 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 AL117187.1-201ENST00000555482 181 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.86□□□□□ -2.11
RAPH1Q70E73 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 MIR4273-201ENST00000582824 84 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 AC022513.1-201ENST00000624512 117 ntBASIC1.86□□□□□ -2.11
RAPH1Q70E73 AC005592.1-201ENST00000566527 1640 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.85□□□□□ -2.11
RAPH1Q70E73 Y_RNA.210-201ENST00000364161 110 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 Y_RNA.222-201ENST00000364264 102 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 MIR30A-201ENST00000385092 71 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AC139712.2-201ENST00000424302 339 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AC092423.1-201ENST00000430165 186 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 MTCYBP9-201ENST00000431021 303 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AL445305.1-201ENST00000432577 575 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.85□□□□□ -2.11
RAPH1Q70E73 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RAPH1Q70E73 SNORD5.1-201ENST00000458800 75 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 snoU13.26-201ENST00000459452 105 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 RNU5F-4P-201ENST00000516581 114 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 RNU4-77P-201ENST00000516692 156 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 SNORA31.17-201ENST00000516953 127 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.85□□□□□ -2.11
RAPH1Q70E73 AC113195.1-201ENST00000579952 141 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AL158827.2-201ENST00000602494 330 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AC124312.5-201ENST00000604451 268 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 SNORA43.4-201ENST00000629559 138 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AL691447.3-201ENST00000635020 330 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.85□□□□□ -2.11
RAPH1Q70E73 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RAPH1Q70E73 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
RAPH1Q70E73 AC245060.5-201ENST00000610778 3293 ntBASIC1.85□□□□□ -2.11
RAPH1Q70E73 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RAPH1Q70E73 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 MIR340-201ENST00000362125 95 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 RNU4-42P-201ENST00000364738 142 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 Y_RNA.396-201ENST00000383949 103 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 Y_RNA.455-201ENST00000384230 98 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 Y_RNA.477-201ENST00000384352 108 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 MIR548F4-201ENST00000408515 105 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 MTCO3P29-201ENST00000432119 779 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 AL645568.3-201ENST00000433683 316 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 DYNLT3P2-201ENST00000442517 295 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 snoU13.15-201ENST00000459407 104 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 RPS29P27-201ENST00000463711 170 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 RPL9P9-202ENST00000466501 579 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 MRPS35P2-201ENST00000508242 191 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 RNU6-1098P-201ENST00000516772 96 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
RAPH1Q70E73 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.84□□□□□ -2.11
RAPH1Q70E73 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-661P-201ENST00000362409 107 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-490P-201ENST00000362985 107 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 Y_RNA.252-201ENST00000364556 101 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-1318P-201ENST00000365389 103 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 Y_RNA.424-201ENST00000384063 103 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-439P-201ENST00000384188 106 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-933P-201ENST00000384424 107 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-823P-201ENST00000391042 103 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 MIR208B-201ENST00000401172 77 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-101P-201ENST00000410323 104 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-1156P-201ENST00000410365 100 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 USP9YP16-201ENST00000430287 407 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.83□□□□□ -2.12
RAPH1Q70E73 USP9YP23-201ENST00000455085 407 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU7-14P-201ENST00000459331 62 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU7-87P-201ENST00000459343 62 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 TOMM22P6-201ENST00000465035 409 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC010655.3-201ENST00000478818 450 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC104564.1-201ENST00000493028 407 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC107393.1-201ENST00000512403 346 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 RNU6-1271P-201ENST00000517049 105 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 Y_RNA.721-201ENST00000517207 102 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC131281.1-201ENST00000522984 164 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC090517.1-201ENST00000569307 266 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC006600.1-201ENST00000572529 153 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.83□□□□□ -2.12
RAPH1Q70E73 7SK.7-201ENST00000603504 247 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.83□□□□□ -2.12
RAPH1Q70E73 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 U2.1-201ENST00000618978 145 ntBASIC1.83□□□□□ -2.12
RAPH1Q70E73 AC009541.1-201ENST00000438279 2662 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms