Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SNORA18.2-201ENST00000383865 132 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 RNU6-47P-201ENST00000383866 107 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 RNU6-1289P-201ENST00000384431 106 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 MIR767-201ENST00000390228 109 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 Z98742.2-201ENST00000431564 187 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 Y_RNA.641-201ENST00000459414 105 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 RPL36AP48-201ENST00000485521 314 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT40Q6A162 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.99□□□□□ -1.93
KRT40Q6A162 SCARNA17.1-201ENST00000516211 143 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 SCARNA17.2-201ENST00000516334 143 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 SCARNA17.4-201ENST00000614296 143 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 MIR3674-201ENST00000636576 68 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KRT40Q6A162 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
KRT40Q6A162 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
KRT40Q6A162 AC092435.3-201ENST00000565538 3654 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 Y_RNA.238-201ENST00000364441 102 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 SNORA72.2-201ENST00000365028 127 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 SNORA67.2-201ENST00000384300 149 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 MIR1289-2-201ENST00000408360 111 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 RNU2-54P-201ENST00000410299 190 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 RNU2-61P-201ENST00000411069 191 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 Y_RNA.793-201ENST00000411222 111 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 EIF4EP4-201ENST00000424916 578 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 AL603825.1-201ENST00000438481 80 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT40Q6A162 RNU7-120P-201ENST00000459334 63 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 COX6CP14-201ENST00000469580 174 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 RNU6-191P-201ENST00000516295 94 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 RN7SKP40-201ENST00000517211 242 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 RNU2-12P-201ENST00000517216 168 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT40Q6A162 AC026470.2-201ENST00000561492 181 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.98□□□□□ -1.93
KRT40Q6A162 TCL6_2.1-201ENST00000615162 119 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT40Q6A162 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
KRT40Q6A162 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
KRT40Q6A162 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KRT40Q6A162 RNU6-682P-201ENST00000363843 106 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 RNU6-514P-201ENST00000384208 107 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 Y_RNA.590-201ENST00000410140 107 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 RNA5SP247-201ENST00000411181 105 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT40Q6A162 RPS27AP9-201ENST00000477681 438 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.97□□□□□ -1.93
KRT40Q6A162 RNU6-155P-201ENST00000516347 100 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 RNU6-344P-201ENST00000516635 111 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 AC022559.1-201ENST00000520905 205 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 DEFB117-201ENST00000602356 141 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 AC110079.1-202ENST00000635213 138 ntBASIC2.97□□□□□ -1.93
KRT40Q6A162 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.97□□□□□ -1.93
KRT40Q6A162 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.97□□□□□ -1.93
KRT40Q6A162 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.96□□□□□ -1.94
KRT40Q6A162 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
KRT40Q6A162 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
KRT40Q6A162 RNU1-72P-201ENST00000362976 153 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 RNU6-1264P-201ENST00000383891 107 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
KRT40Q6A162 RNU6-493P-201ENST00000391321 108 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 Z98742.3-201ENST00000418637 326 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 AC097463.2-201ENST00000421074 142 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 snoU13.23-201ENST00000458863 104 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 RPL31P41-201ENST00000477967 372 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 MRPS36P2-201ENST00000512569 299 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 AC096725.1-201ENST00000514266 313 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 AC109329.2-201ENST00000519658 482 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.96□□□□□ -1.94
KRT40Q6A162 AC015712.3-201ENST00000559380 164 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 MIR5006-201ENST00000583027 110 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.96□□□□□ -1.94
KRT40Q6A162 SNORD11B-201ENST00000607707 90 ntBASIC2.96□□□□□ -1.94
KRT40Q6A162 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
KRT40Q6A162 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
KRT40Q6A162 AL359854.1-201ENST00000614203 1594 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRT40Q6A162 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.95□□□□□ -1.94
KRT40Q6A162 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
KRT40Q6A162 RNA5SP99-201ENST00000364020 114 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 SNORD32B-201ENST00000364460 84 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 Y_RNA.270-201ENST00000364693 104 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 MIR320B2-201ENST00000408479 138 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 COX6CP10-201ENST00000416832 224 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 AL591806.2-201ENST00000433122 173 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 RNU2-44P-201ENST00000516795 194 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 RNU1-117P-201ENST00000517041 158 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.95□□□□□ -1.94
KRT40Q6A162 AP002392.1-201ENST00000537692 208 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.95□□□□□ -1.94
KRT40Q6A162 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.95□□□□□ -1.94
KRT40Q6A162 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.95□□□□□ -1.94
KRT40Q6A162 AC068205.3-201ENST00000636385 468 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.95□□□□□ -1.94
KRT40Q6A162 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
KRT40Q6A162 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.94□□□□□ -1.94
KRT40Q6A162 RNU1-105P-201ENST00000363470 161 ntBASIC2.94□□□□□ -1.94
KRT40Q6A162 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms