Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNU6-1116P-201ENST00000517269 99 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.36□□□□□ -2.35
SCN2BO60939 AC027419.1-201ENST00000522976 328 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 AC009094.1-201ENST00000564443 426 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 AC090616.2-202ENST00000584248 222 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 AC004832.4-201ENST00000608952 331 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 AL121757.2-201ENST00000611223 313 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
SCN2BO60939 AP001506.1-201ENST00000615444 211 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 AF246928.1-201ENST00000623768 87 ntBASIC0.36□□□□□ -2.35
SCN2BO60939 RNU2-29P-201ENST00000410423 189 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AL353193.1-201ENST00000421444 268 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.35□□□□□ -2.35
SCN2BO60939 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.35□□□□□ -2.35
SCN2BO60939 RNU6-232P-201ENST00000517144 64 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.35□□□□□ -2.35
SCN2BO60939 AP002963.1-201ENST00000530590 184 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AL137161.1-201ENST00000532231 390 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 MIR3192-201ENST00000584920 77 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AC011458.1-201ENST00000604034 617 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AC027449.1-201ENST00000608890 407 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AL391903.3-201ENST00000612158 163 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AL136317.1-201ENST00000612653 226 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 AC016597.2-201ENST00000613256 341 ntBASIC0.35□□□□□ -2.35
SCN2BO60939 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
SCN2BO60939 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.35
SCN2BO60939 RNU6-727P-201ENST00000363592 107 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 Y_RNA.330-201ENST00000365230 109 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 RNU6-793P-201ENST00000384233 104 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 RNY1P14-201ENST00000384426 108 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 RNU6-1237P-201ENST00000384777 107 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 MIR526A1-201ENST00000384897 85 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 Z99497.1-201ENST00000421282 135 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 AC133104.1-201ENST00000429100 218 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN2BO60939 AC104332.1-201ENST00000440471 797 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 AC073415.1-201ENST00000449240 153 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 AL033528.1-201ENST00000453780 140 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN2BO60939 AC067940.1-201ENST00000458411 300 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 SNORD42A-201ENST00000459584 64 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN2BO60939 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN2BO60939 RNU6-405P-201ENST00000516637 110 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 RNU7-28P-201ENST00000516759 62 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 MTND1P5-201ENST00000517906 940 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SCN2BO60939 AC023157.2-201ENST00000540596 141 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.34□□□□□ -2.36
SCN2BO60939 AL117336.2-201ENST00000602435 335 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 7SK.10-201ENST00000621414 298 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 AC009161.2-201ENST00000624626 138 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SCN2BO60939 AC005592.1-201ENST00000566527 1640 ntBASIC0.34□□□□□ -2.36
SCN2BO60939 Y_RNA.116-201ENST00000363292 103 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 Y_RNA.201-201ENST00000364052 96 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 Y_RNA.378-201ENST00000365652 113 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 Y_RNA.415-201ENST00000384012 112 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 RNU6-424P-201ENST00000384367 105 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 SNORA26.8-201ENST00000391306 124 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
SCN2BO60939 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.33□□□□□ -2.36
SCN2BO60939 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.33□□□□□ -2.36
SCN2BO60939 RNU7-138P-201ENST00000459479 64 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.33□□□□□ -2.36
SCN2BO60939 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.33□□□□□ -2.36
SCN2BO60939 AC092436.3-201ENST00000511788 257 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 RNU7-12P-201ENST00000516030 62 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 RNU6-496P-201ENST00000516145 99 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 RNU6-1110P-201ENST00000516462 101 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 RNU6-430P-201ENST00000517078 107 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.33□□□□□ -2.36
SCN2BO60939 AC023827.1-201ENST00000569247 97 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 SNORA4-201ENST00000584302 138 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 MIR4424-201ENST00000585257 86 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 AC004223.2-201ENST00000590309 544 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 AL050303.3-201ENST00000613704 284 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 AC122133.1-201ENST00000613964 233 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 AC079248.2-201ENST00000623779 326 ntBASIC0.33□□□□□ -2.36
SCN2BO60939 FER-210ENST00000628534 558 ntTSL 5 BASIC0.33□□□□□ -2.36
SCN2BO60939 AL390237.1-201ENST00000404226 1415 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SCN2BO60939 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 RNU6-1067P-201ENST00000384752 107 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 MIR562-201ENST00000384894 95 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 MT-TH-201ENST00000387441 69 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 RNU6-1158P-201ENST00000391167 107 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 RNU6-325P-201ENST00000411132 105 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN2BO60939 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.32□□□□□ -2.36
SCN2BO60939 AL445567.1-201ENST00000439121 144 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 AC093019.1-201ENST00000443135 252 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 NDUFB4P10-201ENST00000452541 359 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 SNORD11.1-201ENST00000459482 85 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 RPL23AP75-201ENST00000491601 451 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 OR9P1P-201ENST00000496431 281 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN2BO60939 SNORA14.1-201ENST00000516113 141 ntBASIC0.32□□□□□ -2.36
SCN2BO60939 AC022868.1-201ENST00000517767 391 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 286.8 ms