Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MIR1289-2-201ENST00000408360 111 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 RNU2-32P-201ENST00000411193 191 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.61□□□□□ -2.15
HDAC3O15379 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.61□□□□□ -2.15
HDAC3O15379 ATP5EP1-201ENST00000510257 156 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 RNU6-58P-201ENST00000517143 103 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.61□□□□□ -2.15
HDAC3O15379 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.61□□□□□ -2.15
HDAC3O15379 AC090517.1-201ENST00000569307 266 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 AC006600.1-201ENST00000572529 153 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 AC026271.5-201ENST00000577873 130 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.61□□□□□ -2.15
HDAC3O15379 AC125232.2-201ENST00000592457 143 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 AL132822.1-201ENST00000617063 513 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 AC008121.3-201ENST00000618726 433 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 U2.1-201ENST00000618978 145 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
HDAC3O15379 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HDAC3O15379 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.6□□□□□ -2.15
HDAC3O15379 AC005592.1-201ENST00000566527 1640 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 RNA5SP361-201ENST00000362686 118 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 SNORD115-8-201ENST00000363856 82 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 SNORD115-38-201ENST00000365037 82 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 RNU6-1160P-201ENST00000384546 104 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 MIR518A2-201ENST00000384966 87 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 SNORA69.1-201ENST00000390904 137 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 Y_RNA.605-201ENST00000410577 105 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 RN7SKP51-201ENST00000410781 304 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 MTND2P23-201ENST00000422990 651 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 AL590556.1-201ENST00000423231 483 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 EIF1P2-201ENST00000428233 350 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 MTCO3P8-201ENST00000453691 755 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 AC112492.4-201ENST00000456549 352 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 AC007215.1-201ENST00000464893 276 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 AC132942.1-201ENST00000486753 483 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
HDAC3O15379 SNORA25.10-201ENST00000515926 124 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 RNU6-1098P-201ENST00000516772 96 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 RNU7-4P-201ENST00000516961 62 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 AL442663.2-201ENST00000554385 511 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 AC022202.1-201ENST00000613515 211 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.6□□□□□ -2.15
HDAC3O15379 ZNF204P-201ENST00000416749 2397 ntBASIC1.6□□□□□ -2.15
HDAC3O15379 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HDAC3O15379 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HDAC3O15379 Y_RNA.39-201ENST00000362620 98 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU1-76P-201ENST00000362903 159 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 Y_RNA.162-201ENST00000363683 102 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-873P-201ENST00000363833 107 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-743P-201ENST00000364151 106 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 SNORA25B-201ENST00000365507 128 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-546P-201ENST00000383991 107 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-318P-201ENST00000384283 103 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-738P-201ENST00000384531 106 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-159P-201ENST00000391080 106 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HDAC3O15379 USP9YP16-201ENST00000430287 407 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 USP9YP23-201ENST00000455085 407 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 HMGN1P10-201ENST00000474557 553 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 AC010469.2-201ENST00000496412 480 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.59□□□□□ -2.15
HDAC3O15379 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.59□□□□□ -2.15
HDAC3O15379 SNORA4.4-201ENST00000515921 135 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-1046P-201ENST00000516538 107 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 RNU6-667P-201ENST00000517186 102 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 AC022868.1-201ENST00000517767 391 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 AC022616.8-201ENST00000533569 253 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 AC233702.2-202ENST00000562547 291 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 AC090617.3-201ENST00000573670 475 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 MIR5695-201ENST00000579717 85 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.59□□□□□ -2.15
HDAC3O15379 AC005562.2-201ENST00000618264 111 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.59□□□□□ -2.15
HDAC3O15379 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HDAC3O15379 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HDAC3O15379 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.58□□□□□ -2.16
HDAC3O15379 MIR126-201ENST00000362291 85 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 Y_RNA.158-201ENST00000363651 101 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 RNU6-639P-201ENST00000384074 107 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 RNU6-823P-201ENST00000391042 103 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 RNU1-139P-201ENST00000391307 165 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 RNA5SP504-201ENST00000410676 117 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 RNU6-1001P-201ENST00000411265 100 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.58□□□□□ -2.16
HDAC3O15379 CBX3P6-201ENST00000430257 527 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.58□□□□□ -2.16
HDAC3O15379 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.58□□□□□ -2.16
HDAC3O15379 RNU6-1114P-201ENST00000516022 107 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 RNU6-991P-201ENST00000516168 107 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 RNU6-327P-201ENST00000516270 127 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.58□□□□□ -2.16
HDAC3O15379 AC144568.1-201ENST00000520139 137 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.58□□□□□ -2.16
HDAC3O15379 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.58□□□□□ -2.16
HDAC3O15379 AC022254.1-201ENST00000567857 235 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 VN1R91P-201ENST00000594377 169 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 7SK.7-201ENST00000603504 247 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms