Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNA5SP57-201ENST00000459463 123 ntBASIC1.89□□□□□ -2.11
TO15178 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
TO15178 AC074133.1-201ENST00000515696 183 ntBASIC1.89□□□□□ -2.11
TO15178 RNU6-107P-201ENST00000516643 102 ntBASIC1.89□□□□□ -2.11
TO15178 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.89□□□□□ -2.11
TO15178 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.89□□□□□ -2.11
TO15178 MIR4298-201ENST00000584380 73 ntBASIC1.89□□□□□ -2.11
TO15178 AC090971.5-201ENST00000621102 293 ntBASIC1.89□□□□□ -2.11
TO15178 AC091925.1-201ENST00000623204 462 ntBASIC1.89□□□□□ -2.11
TO15178 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TO15178 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TO15178 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
TO15178 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TO15178 Y_RNA.5-201ENST00000362334 102 ntBASIC1.88□□□□□ -2.11
TO15178 Y_RNA.39-201ENST00000362620 98 ntBASIC1.88□□□□□ -2.11
TO15178 RNY3P11-201ENST00000364153 102 ntBASIC1.88□□□□□ -2.11
TO15178 RNU6-318P-201ENST00000384283 103 ntBASIC1.88□□□□□ -2.11
TO15178 SNORA8-201ENST00000384574 139 ntBASIC1.88□□□□□ -2.11
TO15178 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TO15178 MIR1185-2-201ENST00000408687 86 ntBASIC1.88□□□□□ -2.11
TO15178 AL139156.1-201ENST00000412785 841 ntBASIC1.88□□□□□ -2.11
TO15178 RPS20P15-201ENST00000412792 311 ntBASIC1.88□□□□□ -2.11
TO15178 MTCO3P19-201ENST00000415864 321 ntBASIC1.88□□□□□ -2.11
TO15178 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TO15178 AC008134.1-201ENST00000420943 193 ntBASIC1.88□□□□□ -2.11
TO15178 ATP5J2P3-201ENST00000451550 258 ntBASIC1.88□□□□□ -2.11
TO15178 RNU6-221P-201ENST00000459541 99 ntBASIC1.88□□□□□ -2.11
TO15178 RPS29P21-201ENST00000496272 170 ntBASIC1.88□□□□□ -2.11
TO15178 AC023442.1-201ENST00000531247 422 ntBASIC1.88□□□□□ -2.11
TO15178 AK6P2-201ENST00000549020 471 ntBASIC1.88□□□□□ -2.11
TO15178 AL442163.3-201ENST00000554110 156 ntBASIC1.88□□□□□ -2.11
TO15178 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.88□□□□□ -2.11
TO15178 VN1R91P-201ENST00000594377 169 ntBASIC1.88□□□□□ -2.11
TO15178 AL138825.1-201ENST00000618587 192 ntBASIC1.88□□□□□ -2.11
TO15178 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
TO15178 AC138305.3-201ENST00000624988 240 ntBASIC1.88□□□□□ -2.11
TO15178 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.88□□□□□ -2.11
TO15178 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TO15178 Y_RNA.395-201ENST00000383945 109 ntBASIC1.87□□□□□ -2.11
TO15178 Y_RNA.498-201ENST00000384460 102 ntBASIC1.87□□□□□ -2.11
TO15178 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
TO15178 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
TO15178 SNORD12B-201ENST00000410433 91 ntBASIC1.87□□□□□ -2.11
TO15178 AC060773.1-201ENST00000421698 310 ntBASIC1.87□□□□□ -2.11
TO15178 AC018865.2-201ENST00000423631 129 ntBASIC1.87□□□□□ -2.11
TO15178 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TO15178 AL021397.1-201ENST00000451806 248 ntBASIC1.87□□□□□ -2.11
TO15178 AC011406.1-201ENST00000512440 370 ntBASIC1.87□□□□□ -2.11
TO15178 RNU6-1146P-201ENST00000516282 102 ntBASIC1.87□□□□□ -2.11
TO15178 AC092447.9-201ENST00000603395 144 ntBASIC1.87□□□□□ -2.11
TO15178 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
TO15178 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
TO15178 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
TO15178 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
TO15178 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TO15178 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
TO15178 AC006026.1-201ENST00000444025 1803 ntBASIC1.87□□□□□ -2.11
TO15178 Y_RNA.112-201ENST00000363250 102 ntBASIC1.86□□□□□ -2.11
TO15178 SNORD42.2-201ENST00000365570 69 ntBASIC1.86□□□□□ -2.11
TO15178 RNY3P4-201ENST00000384428 101 ntBASIC1.86□□□□□ -2.11
TO15178 Y_RNA.496-201ENST00000384444 101 ntBASIC1.86□□□□□ -2.11
TO15178 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
TO15178 AC096644.2-201ENST00000429278 159 ntBASIC1.86□□□□□ -2.11
TO15178 TOMM22P2-201ENST00000430735 237 ntBASIC1.86□□□□□ -2.11
TO15178 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.86□□□□□ -2.11
TO15178 Y_RNA.639-201ENST00000458981 102 ntBASIC1.86□□□□□ -2.11
TO15178 RNU6-1041P-201ENST00000516254 102 ntBASIC1.86□□□□□ -2.11
TO15178 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
TO15178 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
TO15178 AC025647.1-201ENST00000517879 253 ntBASIC1.86□□□□□ -2.11
TO15178 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.86□□□□□ -2.11
TO15178 AC006600.1-201ENST00000572529 153 ntBASIC1.86□□□□□ -2.11
TO15178 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
TO15178 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
TO15178 uc_338.22-201ENST00000622722 187 ntBASIC1.86□□□□□ -2.11
TO15178 MIR4272-201ENST00000635924 64 ntBASIC1.86□□□□□ -2.11
TO15178 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TO15178 AC245060.5-201ENST00000610778 3293 ntBASIC1.86□□□□□ -2.11
TO15178 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TO15178 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TO15178 MIR369-201ENST00000362155 70 ntBASIC1.85□□□□□ -2.11
TO15178 RNU6-1240P-201ENST00000365155 104 ntBASIC1.85□□□□□ -2.11
TO15178 RNU6-1264P-201ENST00000383891 107 ntBASIC1.85□□□□□ -2.11
TO15178 SNORA48.1-201ENST00000390879 135 ntBASIC1.85□□□□□ -2.11
TO15178 MIR1253-201ENST00000408273 105 ntBASIC1.85□□□□□ -2.11
TO15178 AL137792.2-201ENST00000443484 235 ntBASIC1.85□□□□□ -2.11
TO15178 SNORA40.9-201ENST00000515895 93 ntBASIC1.85□□□□□ -2.11
TO15178 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.85□□□□□ -2.11
TO15178 AC018448.1-201ENST00000552843 316 ntBASIC1.85□□□□□ -2.11
TO15178 AL353149.1-201ENST00000610667 244 ntBASIC1.85□□□□□ -2.11
TO15178 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms