Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL359821.1-201ENST00000605519 182 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 FAM157A-202ENST00000615155 405 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 AC006504.8-201ENST00000621046 635 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 AC018630.2-201ENST00000534866 2403 ntBASIC0.97□□□□□ -2.25
LRRC40Q9H9A6 RNU4-79P-201ENST00000362764 141 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 SNORD50.1-201ENST00000362987 71 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 U3.8-201ENST00000363675 217 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.167-201ENST00000363735 109 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 SNORD115-8-201ENST00000363856 82 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 RNU4-9P-201ENST00000364951 139 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 SNORD115-38-201ENST00000365037 82 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.481-201ENST00000384373 102 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.595-201ENST00000410403 105 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 RPL23AP36-201ENST00000413895 458 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 RNU7-94P-201ENST00000459576 63 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 COX6CP14-201ENST00000469580 174 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 AC048334.1-201ENST00000477975 159 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 RNU6-58P-201ENST00000517143 103 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 GHRLOS.1-201ENST00000610995 70 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.96□□□□□ -2.26
LRRC40Q9H9A6 SNORD113-7-201ENST00000363762 77 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.553-201ENST00000384670 102 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 MIR660-201ENST00000385235 97 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 MTCO1P19-201ENST00000443487 500 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 NDUFB4P10-201ENST00000452541 359 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 RNU7-187P-201ENST00000458985 68 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC105758.1-201ENST00000506038 399 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 SCARNA16.2-201ENST00000516520 172 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 FRG2DP-202ENST00000566967 323 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC008088.1-201ENST00000580993 280 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC063944.3-201ENST00000609969 533 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 AC121333.1-201ENST00000567488 2709 ntBASIC0.95□□□□□ -2.26
LRRC40Q9H9A6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 SNORA12.1-201ENST00000390873 148 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 Z82188.1-201ENST00000436709 154 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 AC079354.2-201ENST00000453523 154 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 AC083904.1-201ENST00000487828 231 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 RNU6-237P-201ENST00000515985 71 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 RNU6-947P-201ENST00000516264 106 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 MIR4498-201ENST00000577599 66 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 MIR4778-201ENST00000577635 80 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 AL020996.3-201ENST00000606617 222 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 AC097520.1-201ENST00000624435 385 ntBASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
LRRC40Q9H9A6 RNU6-727P-201ENST00000363592 107 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 RNU6-873P-201ENST00000363833 107 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 SNORD115-32-201ENST00000364079 82 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.319-201ENST00000365138 92 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.359-201ENST00000365498 102 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 MIR514A2-201ENST00000385131 88 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 MIR514A3-201ENST00000385132 88 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 MTCO1P20-201ENST00000425366 358 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 RN7SKP49-201ENST00000516675 260 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AC007834.2-201ENST00000536310 343 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AK6P2-201ENST00000549020 471 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AC078883.4-201ENST00000623218 367 ntBASIC0.93□□□□□ -2.26
LRRC40Q9H9A6 AP000568.1-201ENST00000282964 442 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.151-201ENST00000363566 112 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 RNU6-128P-201ENST00000383976 107 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.415-201ENST00000384012 112 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 RNU6-541P-201ENST00000384709 110 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 MIR153-2-201ENST00000385225 87 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 RNU6-648P-201ENST00000410190 107 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 AC063976.4-201ENST00000421971 163 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 AL445305.1-201ENST00000432577 575 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 STAG3L5P-204ENST00000443759 179 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 PCMTD1P1-201ENST00000455560 355 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 RNU6-835P-201ENST00000516974 104 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 AC006362.1-201ENST00000567392 174 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 MTND4P12-201ENST00000498999 1377 ntBASIC0.92□□□□□ -2.26
LRRC40Q9H9A6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 RNU6-199P-201ENST00000362954 107 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 RNU6-254P-201ENST00000363377 107 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 Y_RNA.231-201ENST00000364358 102 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms