Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 MIR5006-201ENST00000583027 110 ntBASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 MIR4781-201ENST00000585250 76 ntBASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 7SK.7-201ENST00000603504 247 ntBASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 TCL6_2.1-201ENST00000615162 119 ntBASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 AC090971.5-201ENST00000621102 293 ntBASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
LYSMD4Q5XG99 MIR378A-201ENST00000362177 66 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RNU6-545P-201ENST00000362681 104 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RNA5SP361-201ENST00000362686 118 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RNU6-727P-201ENST00000363592 107 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 Y_RNA.226-201ENST00000364337 114 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 SNORD31B-201ENST00000364977 69 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RNA5SP190-201ENST00000365222 118 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 Y_RNA.577-201ENST00000384794 101 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RNU6-159P-201ENST00000391080 106 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 SNORA17.3-201ENST00000391159 129 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RPS20P15-201ENST00000412792 311 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 AC007098.1-201ENST00000420122 367 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 AC123900.1-201ENST00000420390 96 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 MTND1P14-201ENST00000427400 950 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 MTCO2P12-201ENST00000427426 682 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 AL160004.2-201ENST00000432935 350 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 UBE2V1P7-201ENST00000446395 340 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 Y_RNA.639-201ENST00000458981 102 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 RNU6-1170P-201ENST00000515974 106 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 SNORA25.14-201ENST00000516481 132 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 SNRPGP20-201ENST00000604477 205 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 AC138305.3-201ENST00000624988 240 ntBASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LYSMD4Q5XG99 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
LYSMD4Q5XG99 AC005336.3-201ENST00000623833 2679 ntBASIC1.9□□□□□ -2.1
LYSMD4Q5XG99 Y_RNA.364-201ENST00000365532 101 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 Y_RNA.431-201ENST00000384086 102 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 RNY1P14-201ENST00000384426 108 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 RNU6-160P-201ENST00000384591 107 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 PMCHL1-202ENST00000423102 261 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AC018865.2-201ENST00000423631 129 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 USP9YP16-201ENST00000430287 407 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 USP9YP23-201ENST00000455085 407 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AC022868.1-201ENST00000517767 391 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AC125232.2-201ENST00000592457 143 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AC092447.9-201ENST00000603395 144 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 MZT1P2-201ENST00000604387 248 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AC006157.1-201ENST00000611750 366 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 AC091925.1-201ENST00000623204 462 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 BX322639.1-202ENST00000423987 2213 ntBASIC1.9□□□□□ -2.11
LYSMD4Q5XG99 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 RNU1-58P-201ENST00000362413 163 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 SNORD115-8-201ENST00000363856 82 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 RNU4-42P-201ENST00000364738 142 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 SNORD87-201ENST00000364849 89 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 SNORD115-38-201ENST00000365037 82 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 Y_RNA.395-201ENST00000383945 109 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 Y_RNA.445-201ENST00000384168 102 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 RNU6-281P-201ENST00000384212 103 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 MIR320B2-201ENST00000408479 138 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 RNU6-1001P-201ENST00000411265 100 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 EIF1P2-201ENST00000428233 350 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC003989.2-201ENST00000440224 169 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC016925.1-201ENST00000458303 298 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 SNORD13-201ENST00000459299 104 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 RNA5SP54-201ENST00000516951 92 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 RNU1-117P-201ENST00000517041 158 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 SNORD116.3-201ENST00000517176 78 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AP005660.1-201ENST00000522972 293 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC020661.2-201ENST00000560114 134 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC090617.3-201ENST00000573670 475 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC044792.1-201ENST00000593294 196 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 SNORD58B-201ENST00000607313 66 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC005296.1-201ENST00000616145 209 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 AC130454.1-201ENST00000622948 401 ntBASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.89□□□□□ -2.11
LYSMD4Q5XG99 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.88□□□□□ -2.11
LYSMD4Q5XG99 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LYSMD4Q5XG99 Y_RNA.428-201ENST00000384078 102 ntBASIC1.88□□□□□ -2.11
LYSMD4Q5XG99 RNU6-318P-201ENST00000384283 103 ntBASIC1.88□□□□□ -2.11
LYSMD4Q5XG99 MIR625-201ENST00000385047 85 ntBASIC1.88□□□□□ -2.11
LYSMD4Q5XG99 SNORA69.1-201ENST00000390904 137 ntBASIC1.88□□□□□ -2.11
LYSMD4Q5XG99 RNA5SP465-201ENST00000391195 109 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 216.5 ms