Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 UBL5P4-201ENST00000562584 236 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGCS1Q01581 SNORA77B-201ENST00000578179 125 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
HMGCS1Q01581 MIR6128-201ENST00000615528 109 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC007014.2-201ENST00000615581 479 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC009248.2-201ENST00000619826 254 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AC095038.3-201ENST00000634439 195 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 AL133216.2-202ENST00000634512 349 ntBASIC1.19□□□□□ -2.22
HMGCS1Q01581 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMGCS1Q01581 RNU6-873P-201ENST00000363833 107 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 RNU6-271P-201ENST00000363858 105 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 SNORD87-201ENST00000364849 89 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 Y_RNA.319-201ENST00000365138 92 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 RNU6-842P-201ENST00000384269 107 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 Y_RNA.473-201ENST00000384333 102 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 RNU6-417P-201ENST00000384712 107 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 MIR153-2-201ENST00000385225 87 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMGCS1Q01581 MIR320B2-201ENST00000408479 138 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 RNU2-7P-201ENST00000410794 178 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AC016909.1-201ENST00000415916 166 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AC243428.1-201ENST00000421099 264 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.18□□□□□ -2.22
HMGCS1Q01581 HMGN2P34-201ENST00000437647 269 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 MTND4LP16-201ENST00000440828 295 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AC245517.4-201ENST00000448601 281 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 MTND1P17-201ENST00000448961 204 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGCS1Q01581 AC114982.1-201ENST00000469402 321 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AC069439.1-201ENST00000494739 167 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AK6P2-201ENST00000549020 471 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 MIR4273-201ENST00000582824 84 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AL353149.1-201ENST00000610667 244 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 AL078596.1-201ENST00000624856 447 ntBASIC1.18□□□□□ -2.22
HMGCS1Q01581 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMGCS1Q01581 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMGCS1Q01581 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMGCS1Q01581 Y_RNA.6-201ENST00000362350 114 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 snoU2-30.2-201ENST00000362805 70 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 Y_RNA.86-201ENST00000363020 111 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RNU6-727P-201ENST00000363592 107 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RNU6-414P-201ENST00000363705 104 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 SNORA63D-201ENST00000364359 132 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 Y_RNA.287-201ENST00000364853 94 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RNU6-17P-201ENST00000384245 107 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RNU6-18P-201ENST00000384527 107 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RNA5SP467-201ENST00000391274 118 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 MIR1277-201ENST00000408536 78 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 MIR1267-201ENST00000408723 78 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGCS1Q01581 CST2P1-201ENST00000425770 87 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.17□□□□□ -2.22
HMGCS1Q01581 MTCO3P29-201ENST00000432119 779 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AC073910.1-201ENST00000445047 438 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGCS1Q01581 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RPL26P26-201ENST00000480251 434 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RNA5SP445-201ENST00000515889 115 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 Y_RNA.682-201ENST00000516457 100 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 RNU6-902P-201ENST00000517212 91 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 SNORD11B-201ENST00000607707 90 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AC093913.1-201ENST00000614178 329 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AL157834.3-201ENST00000615543 103 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AC002553.4-201ENST00000616896 331 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HMGCS1Q01581 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.17□□□□□ -2.22
HMGCS1Q01581 AL359697.1-201ENST00000624879 587 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AC008873.1-201ENST00000625051 138 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
HMGCS1Q01581 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMGCS1Q01581 MTND4P12-201ENST00000498999 1377 ntBASIC1.17□□□□□ -2.22
HMGCS1Q01581 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.17□□□□□ -2.22
HMGCS1Q01581 AL391987.6-201ENST00000305671 199 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 Y_RNA.405-201ENST00000383979 100 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 Y_RNA.415-201ENST00000384012 112 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 RNU6-245P-201ENST00000384020 107 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 RNU6-1013P-201ENST00000384180 107 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 Y_RNA.451-201ENST00000384200 100 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 Y_RNA.524-201ENST00000384564 100 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 Y_RNA.561-201ENST00000384694 100 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 RNU6-541P-201ENST00000384709 110 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 RNU6-360P-201ENST00000390944 104 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 RNU6-159P-201ENST00000391080 106 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.16□□□□□ -2.22
HMGCS1Q01581 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGCS1Q01581 MTND1P34-201ENST00000438556 671 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGCS1Q01581 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 RNU6-329P-201ENST00000459618 107 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 AL163540.1-201ENST00000485382 386 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 261.4 ms