Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR548I2-201ENST00000408348 149 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.07□□□□□ -1.92
NPHS1O60500 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 AL121890.1-201ENST00000435457 205 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 AC016717.1-201ENST00000448918 286 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 RN7SKP164-201ENST00000516138 266 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 AC023632.4-201ENST00000517783 191 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 Y_RNA.802-201ENST00000614892 130 ntBASIC3.07□□□□□ -1.92
NPHS1O60500 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.07□□□□□ -1.92
NPHS1O60500 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPHS1O60500 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NPHS1O60500 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPHS1O60500 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPHS1O60500 Y_RNA.357-201ENST00000365487 109 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 RNU6-975P-201ENST00000384296 105 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 MIR134-201ENST00000385258 73 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 PTMAP2-201ENST00000397627 327 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 RNU6-57P-201ENST00000411348 103 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 RPL23AP7-203ENST00000449021 469 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.06□□□□□ -1.92
NPHS1O60500 RNU6-965P-201ENST00000516721 96 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 SCARNA3-201ENST00000517097 143 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.06□□□□□ -1.92
NPHS1O60500 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.06□□□□□ -1.92
NPHS1O60500 MIR3684-201ENST00000579779 74 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 MIR4744-201ENST00000581563 82 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 MIR3199-1-201ENST00000582434 88 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 snoZ196.1-201ENST00000625269 89 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 MTND1P7-201ENST00000632801 297 ntBASIC3.06□□□□□ -1.92
NPHS1O60500 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.06□□□□□ -1.92
NPHS1O60500 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPHS1O60500 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPHS1O60500 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
NPHS1O60500 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
NPHS1O60500 RNU6-1205P-201ENST00000363625 106 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 RNU6-818P-201ENST00000364837 108 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 RNU6-969P-201ENST00000383900 105 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 RNU6-449P-201ENST00000383914 107 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 RNU6-578P-201ENST00000390980 103 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 MIR873-201ENST00000401120 77 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 MIR1289-1-201ENST00000408836 144 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 RNA5SP274-201ENST00000410484 108 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 MICF-203ENST00000432679 129 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 RPL23AP58-201ENST00000440453 469 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 AC114982.1-201ENST00000469402 321 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 SCARNA8-201ENST00000515924 131 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 RNU6-453P-201ENST00000516819 85 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 AC034105.4-201ENST00000568304 277 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 MIR3922-201ENST00000585192 84 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 AP001485.1-201ENST00000604799 199 ntBASIC3.05□□□□□ -1.92
NPHS1O60500 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPHS1O60500 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPHS1O60500 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPHS1O60500 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
NPHS1O60500 RNA5SP50-201ENST00000363731 107 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 U8.7-201ENST00000364940 136 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 SNORD31B-201ENST00000364977 69 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 RPS29P4-201ENST00000414733 161 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 HSPE1P21-201ENST00000438283 308 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.04□□□□□ -1.92
NPHS1O60500 AC074290.1-201ENST00000448883 135 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 SNORD65B-201ENST00000459126 73 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 RNU6-221P-201ENST00000459541 99 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 RN7SL601P-201ENST00000471221 293 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHS1O60500 RNU6-1337P-201ENST00000516525 95 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 AC027419.1-201ENST00000522976 328 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHS1O60500 MIR1254-2-201ENST00000579553 63 ntBASIC3.04□□□□□ -1.92
NPHS1O60500 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHS1O60500 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.04□□□□□ -1.92
NPHS1O60500 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NPHS1O60500 SNORD114-7-201ENST00000362520 77 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 SNORA27.1-201ENST00000362604 124 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 RNU6-103P-201ENST00000363686 107 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 SNORA62.3-201ENST00000365110 153 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 SNORD21-201ENST00000383953 95 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 RNU6-418P-201ENST00000384035 107 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 SNORD116-13-201ENST00000384408 92 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 U6atac.2-201ENST00000408644 118 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
NPHS1O60500 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.03□□□□□ -1.92
NPHS1O60500 RN7SL20P-201ENST00000488827 297 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 AC117454.1-201ENST00000491120 168 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 AC005840.1-201ENST00000498412 377 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 AC018630.3-201ENST00000542637 96 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NPHS1O60500 AC105245.1-201ENST00000581934 244 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NPHS1O60500 MIR1248-201ENST00000629190 106 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NPHS1O60500 AC068647.2-201ENST00000637380 353 ntBASIC3.03□□□□□ -1.92
NPHS1O60500 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.03□□□□□ -1.92
NPHS1O60500 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPHS1O60500 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NPHS1O60500 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NPHS1O60500 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 304.8 ms