Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MIR514B-201ENST00000516774 80 ntBASIC1.77□□□□□ -2.13
PHF1O43189 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
PHF1O43189 MIR2355-201ENST00000517199 87 ntBASIC1.77□□□□□ -2.13
PHF1O43189 AC007229.1-201ENST00000590455 412 ntBASIC1.77□□□□□ -2.13
PHF1O43189 AC125232.2-201ENST00000592457 143 ntBASIC1.77□□□□□ -2.13
PHF1O43189 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.77□□□□□ -2.13
PHF1O43189 AL132822.1-201ENST00000617063 513 ntBASIC1.77□□□□□ -2.13
PHF1O43189 AL606534.2-204ENST00000635008 178 ntBASIC1.77□□□□□ -2.13
PHF1O43189 MTND5P16-201ENST00000460269 1703 ntBASIC1.77□□□□□ -2.13
PHF1O43189 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PHF1O43189 SNORA22B-201ENST00000383876 138 ntBASIC1.76□□□□□ -2.13
PHF1O43189 RNU6-281P-201ENST00000384212 103 ntBASIC1.76□□□□□ -2.13
PHF1O43189 Y_RNA.557-201ENST00000384680 107 ntBASIC1.76□□□□□ -2.13
PHF1O43189 SNORA69.1-201ENST00000390904 137 ntBASIC1.76□□□□□ -2.13
PHF1O43189 RNU6-308P-201ENST00000390957 107 ntBASIC1.76□□□□□ -2.13
PHF1O43189 RNU2-63P-201ENST00000410792 194 ntBASIC1.76□□□□□ -2.13
PHF1O43189 USP9YP16-201ENST00000430287 407 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.76□□□□□ -2.13
PHF1O43189 USP9YP23-201ENST00000455085 407 ntBASIC1.76□□□□□ -2.13
PHF1O43189 U8.22-201ENST00000459141 133 ntBASIC1.76□□□□□ -2.13
PHF1O43189 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.76□□□□□ -2.13
PHF1O43189 SNORA40.14-201ENST00000516543 86 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC144568.1-201ENST00000520139 137 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC022616.8-201ENST00000533569 253 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AL442663.2-201ENST00000554385 511 ntBASIC1.76□□□□□ -2.13
PHF1O43189 MIR5002-201ENST00000584713 97 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC078899.2-201ENST00000595282 212 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC022432.1-201ENST00000595739 310 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC092447.9-201ENST00000603395 144 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC007485.1-201ENST00000616755 206 ntBASIC1.76□□□□□ -2.13
PHF1O43189 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.76□□□□□ -2.13
PHF1O43189 AC090517.3-201ENST00000625170 141 ntBASIC1.76□□□□□ -2.13
PHF1O43189 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
PHF1O43189 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.76□□□□□ -2.13
PHF1O43189 RNY1P10-201ENST00000363268 113 ntBASIC1.75□□□□□ -2.13
PHF1O43189 Y_RNA.116-201ENST00000363292 103 ntBASIC1.75□□□□□ -2.13
PHF1O43189 Y_RNA.216-201ENST00000364205 93 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AL590556.1-201ENST00000423231 483 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AC009237.7-201ENST00000447357 229 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AC107032.1-201ENST00000485945 480 ntBASIC1.75□□□□□ -2.13
PHF1O43189 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.75□□□□□ -2.13
PHF1O43189 AC023442.1-201ENST00000531247 422 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AP003072.1-201ENST00000531740 145 ntBASIC1.75□□□□□ -2.13
PHF1O43189 UBL5P4-201ENST00000562584 236 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.75□□□□□ -2.13
PHF1O43189 VN1R91P-201ENST00000594377 169 ntBASIC1.75□□□□□ -2.13
PHF1O43189 TCL6_2.1-201ENST00000615162 119 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AC005562.2-201ENST00000618264 111 ntBASIC1.75□□□□□ -2.13
PHF1O43189 AL138825.1-201ENST00000618587 192 ntBASIC1.75□□□□□ -2.13
PHF1O43189 U2.1-201ENST00000618978 145 ntBASIC1.75□□□□□ -2.13
PHF1O43189 RNU1-62P-201ENST00000362599 164 ntBASIC1.74□□□□□ -2.13
PHF1O43189 Y_RNA.39-201ENST00000362620 98 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU6-1301P-201ENST00000362724 104 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU5F-3P-201ENST00000363767 117 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU6-873P-201ENST00000363833 107 ntBASIC1.74□□□□□ -2.13
PHF1O43189 Y_RNA.314-201ENST00000365114 102 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU6-234P-201ENST00000365229 104 ntBASIC1.74□□□□□ -2.13
PHF1O43189 SNORA33.2-201ENST00000365413 134 ntBASIC1.74□□□□□ -2.13
PHF1O43189 Y_RNA.358-201ENST00000365491 99 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU6-26P-201ENST00000383985 107 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU6-318P-201ENST00000384283 103 ntBASIC1.74□□□□□ -2.13
PHF1O43189 SNORA67.2-201ENST00000384300 149 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNY3P4-201ENST00000384428 101 ntBASIC1.74□□□□□ -2.13
PHF1O43189 MIR329-1-201ENST00000385028 80 ntBASIC1.74□□□□□ -2.13
PHF1O43189 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PHF1O43189 Y_RNA.645-201ENST00000391229 102 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AC007395.1-201ENST00000451333 677 ntBASIC1.74□□□□□ -2.13
PHF1O43189 snoU13.18-201ENST00000459483 104 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AC093852.1-201ENST00000503587 266 ntBASIC1.74□□□□□ -2.13
PHF1O43189 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.74□□□□□ -2.13
PHF1O43189 SNORA25.10-201ENST00000515926 124 ntBASIC1.74□□□□□ -2.13
PHF1O43189 Y_RNA.661-201ENST00000516003 99 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU6-344P-201ENST00000516635 111 ntBASIC1.74□□□□□ -2.13
PHF1O43189 RNU6-988P-201ENST00000519081 107 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.74□□□□□ -2.13
PHF1O43189 NDUFA5P6-201ENST00000542110 379 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AL442163.3-201ENST00000554110 156 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.74□□□□□ -2.13
PHF1O43189 ANP32BP3-201ENST00000559213 706 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AC090517.1-201ENST00000569307 266 ntBASIC1.74□□□□□ -2.13
PHF1O43189 MIR4529-201ENST00000578110 78 ntBASIC1.74□□□□□ -2.13
PHF1O43189 MIR5188-201ENST00000583467 113 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AL096840.1-201ENST00000603287 93 ntBASIC1.74□□□□□ -2.13
PHF1O43189 SNRPGP20-201ENST00000604477 205 ntBASIC1.74□□□□□ -2.13
PHF1O43189 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.74□□□□□ -2.13
PHF1O43189 AC008873.1-201ENST00000625051 138 ntBASIC1.74□□□□□ -2.13
PHF1O43189 AC099654.10-201ENST00000640395 161 ntBASIC1.74□□□□□ -2.13
PHF1O43189 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
PHF1O43189 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.74□□□□□ -2.13
PHF1O43189 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
PHF1O43189 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
PHF1O43189 ZNF204P-201ENST00000416749 2397 ntBASIC1.73□□□□□ -2.13
PHF1O43189 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
PHF1O43189 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PHF1O43189 Y_RNA.202-201ENST00000364083 110 ntBASIC1.73□□□□□ -2.13
PHF1O43189 RNU6-280P-201ENST00000364145 104 ntBASIC1.73□□□□□ -2.13
PHF1O43189 RNY3P11-201ENST00000364153 102 ntBASIC1.73□□□□□ -2.13
PHF1O43189 AC117470.1-201ENST00000381974 330 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 254.1 ms