Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.65□□□□□ -2.15
HDAC3O15379 AC027288.2-201ENST00000553028 243 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 AC110588.1-201ENST00000559699 137 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.65□□□□□ -2.15
HDAC3O15379 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.65□□□□□ -2.15
HDAC3O15379 AL670379.2-201ENST00000604983 252 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 Y_RNA.812-201ENST00000610788 101 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 Y_RNA.784-201ENST00000613803 101 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 Y_RNA.787-201ENST00000616522 101 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 Y_RNA.780-201ENST00000617336 101 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 Y_RNA.801-201ENST00000619005 101 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 MIR5739-201ENST00000619803 80 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
HDAC3O15379 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.65□□□□□ -2.15
HDAC3O15379 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HDAC3O15379 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HDAC3O15379 AC091812.1-201ENST00000432235 1948 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 SNORD115-32-201ENST00000364079 82 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 Y_RNA.364-201ENST00000365532 101 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 RNU6-708P-201ENST00000384217 107 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 RNU6-17P-201ENST00000384245 107 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 RNU6-18P-201ENST00000384527 107 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 RNU6-700P-201ENST00000391043 107 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 MIR190B-201ENST00000401119 79 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 RNU2-48P-201ENST00000410694 191 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 RPS26P42-201ENST00000413485 326 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 AC113618.1-201ENST00000416747 285 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.64□□□□□ -2.15
HDAC3O15379 MTND2P29-201ENST00000438595 412 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 AL161788.1-201ENST00000441805 169 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 AP000870.1-201ENST00000472927 406 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.64□□□□□ -2.15
HDAC3O15379 RNA5SP182-201ENST00000516064 82 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 SNORA48.11-201ENST00000517015 89 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 UBL5P4-201ENST00000562584 236 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 MIR3923-201ENST00000579521 83 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 AC083806.3-201ENST00000614016 455 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.64□□□□□ -2.15
HDAC3O15379 MIR4272-201ENST00000635924 64 ntBASIC1.64□□□□□ -2.15
HDAC3O15379 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.64□□□□□ -2.15
HDAC3O15379 Y_RNA.202-201ENST00000364083 110 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 SNORA63C-201ENST00000364578 129 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 Y_RNA.358-201ENST00000365491 99 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 MIR29B2-201ENST00000385055 81 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 RNU6-1093P-201ENST00000391194 107 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 AL590004.1-201ENST00000405321 300 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 MTCYBP10-201ENST00000424905 650 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 RNU7-87P-201ENST00000459343 62 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 snoU13.15-201ENST00000459407 104 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 snoU13.26-201ENST00000459452 105 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 UBL5P3-201ENST00000475112 231 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 RNU7-175P-201ENST00000515915 61 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.63□□□□□ -2.15
HDAC3O15379 MIR4680-201ENST00000580906 66 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.63□□□□□ -2.15
HDAC3O15379 AC104695.3-201ENST00000604052 296 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.63□□□□□ -2.15
HDAC3O15379 MIR1248-201ENST00000629190 106 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 AL606534.2-204ENST00000635008 178 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HDAC3O15379 MTND5P16-201ENST00000460269 1703 ntBASIC1.63□□□□□ -2.15
HDAC3O15379 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
HDAC3O15379 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HDAC3O15379 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HDAC3O15379 RNU6-450P-201ENST00000364654 107 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RNU4-56P-201ENST00000364700 142 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RNU1-115P-201ENST00000365329 160 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RNU6-26P-201ENST00000383985 107 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 Y_RNA.527-201ENST00000384573 102 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 Y_RNA.557-201ENST00000384680 107 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 MIR606-201ENST00000384851 96 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RNA5SP213-201ENST00000391031 106 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 MRPL42P3-201ENST00000401492 326 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 Y_RNA.592-201ENST00000410274 109 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 AC007098.1-201ENST00000420122 367 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 HMGN2P3-201ENST00000433603 273 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 HMGN2P5-201ENST00000436882 273 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.62□□□□□ -2.15
HDAC3O15379 AC099799.1-201ENST00000439809 192 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.62□□□□□ -2.15
HDAC3O15379 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RNU6-567P-201ENST00000516746 107 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 Y_RNA.706-201ENST00000516933 99 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RNU6-988P-201ENST00000519081 107 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HDAC3O15379 AC018630.3-201ENST00000542637 96 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 EIF4A1P12-201ENST00000551910 141 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.62□□□□□ -2.15
HDAC3O15379 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.62□□□□□ -2.15
HDAC3O15379 MIR5188-201ENST00000583467 113 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 AL360085.1-201ENST00000604713 532 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 AC100812.1-201ENST00000607622 580 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 RMST_6.1-201ENST00000611980 203 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.62□□□□□ -2.15
HDAC3O15379 U3.9-201ENST00000363823 204 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 Y_RNA.319-201ENST00000365138 92 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 SNORA18.2-201ENST00000383865 132 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 MIR10B-201ENST00000385011 110 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 MIR625-201ENST00000385047 85 ntBASIC1.61□□□□□ -2.15
HDAC3O15379 MIR153-2-201ENST00000385225 87 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms