Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mre11Q61216 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Mre11Q61216 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Mre11Q61216 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mre11Q61216 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mre11Q61216 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mre11Q61216 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mre11Q61216 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.33■□□□□ 0.69
Mre11Q61216 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mre11Q61216 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.33■□□□□ 0.68
Mre11Q61216 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.33■□□□□ 0.68
Mre11Q61216 Gm10517-202ENSMUST00000192970 758 ntBASIC19.33■□□□□ 0.68
Mre11Q61216 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.33■□□□□ 0.68
Mre11Q61216 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mre11Q61216 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mre11Q61216 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mre11Q61216 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.33■□□□□ 0.68
Mre11Q61216 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mre11Q61216 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.33■□□□□ 0.68
Mre11Q61216 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Mre11Q61216 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mre11Q61216 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Mre11Q61216 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.33■□□□□ 0.68
Mre11Q61216 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mre11Q61216 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Mre11Q61216 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC19.32■□□□□ 0.68
Mre11Q61216 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.32■□□□□ 0.68
Mre11Q61216 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.32■□□□□ 0.68
Mre11Q61216 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.32■□□□□ 0.68
Mre11Q61216 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Mre11Q61216 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Mre11Q61216 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mre11Q61216 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Mre11Q61216 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.31■□□□□ 0.68
Mre11Q61216 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Mre11Q61216 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.31■□□□□ 0.68
Mre11Q61216 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Mre11Q61216 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.31■□□□□ 0.68
Mre11Q61216 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.31■□□□□ 0.68
Mre11Q61216 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.31■□□□□ 0.68
Mre11Q61216 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Mre11Q61216 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mre11Q61216 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Mre11Q61216 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Mre11Q61216 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Mre11Q61216 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.3■□□□□ 0.68
Mre11Q61216 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mre11Q61216 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mre11Q61216 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mre11Q61216 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 316.1 ms