Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 MT-TL1-201ENST00000386347 75 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 AL627390.1-201ENST00000396055 340 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 RPL37P10-201ENST00000412884 288 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 AC114982.1-201ENST00000469402 321 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 HMGN2P9-201ENST00000476875 229 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 AC027288.2-201ENST00000553028 243 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 HSBP1P1-201ENST00000555205 166 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 MIR3683-201ENST00000580847 82 ntBASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 RNU1-17P-201ENST00000363022 152 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-727P-201ENST00000363592 107 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-112P-201ENST00000363599 104 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-873P-201ENST00000363833 107 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 RN7SKP210-201ENST00000459176 261 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 AC103851.1-201ENST00000506833 274 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 AC026782.1-201ENST00000512952 449 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 AC046134.1-201ENST00000514454 666 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.670-201ENST00000516255 105 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 AC009229.3-201ENST00000608056 282 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 AL078596.1-201ENST00000624856 447 ntBASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.59□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-845P-201ENST00000362578 103 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-862P-201ENST00000362804 105 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 SNORD115-8-201ENST00000363856 82 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-595P-201ENST00000363944 107 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 SNORD115-38-201ENST00000365037 82 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-245P-201ENST00000384020 107 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-17P-201ENST00000384245 107 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-975P-201ENST00000384296 105 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-18P-201ENST00000384527 107 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-57P-201ENST00000411348 103 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RPL21P111-201ENST00000418453 477 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 USMG5P1-201ENST00000425964 177 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 AL353997.1-201ENST00000432936 108 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 AC074290.1-201ENST00000448883 135 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RPL31P58-201ENST00000469001 379 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 MTND4P17-201ENST00000470444 350 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RPL7P42-201ENST00000481005 679 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-948P-201ENST00000516374 107 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 AC134698.4-201ENST00000523451 826 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 AC069114.2-201ENST00000604699 304 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 AL355802.3-201ENST00000607571 545 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 SNORD11B-201ENST00000607707 90 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 PISRT1.1-201ENST00000616930 107 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 AC006001.4-201ENST00000622243 395 ntBASIC1.58□□□□□ -2.16
ATG4BQ9Y4P1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-137P-201ENST00000363680 108 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-593P-201ENST00000364716 112 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.279-201ENST00000364763 95 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 SNORD87-201ENST00000364849 89 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-296P-201ENST00000384608 107 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 MIR586-201ENST00000385035 97 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNA5SP213-201ENST00000391031 106 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RPS20P15-201ENST00000412792 311 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 AC060773.1-201ENST00000421698 310 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 MTND3P10-201ENST00000450967 341 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-498P-201ENST00000459468 107 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNU7-57P-201ENST00000459540 60 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 AP000870.1-201ENST00000472927 406 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 AC025465.3-201ENST00000510570 311 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 MIR5695-201ENST00000579717 85 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 uc_338.5-201ENST00000611839 155 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ATG4BQ9Y4P1 RNU6-222P-201ENST00000362438 107 ntBASIC1.56□□□□□ -2.16
ATG4BQ9Y4P1 RNU1-96P-201ENST00000364163 162 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms