Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.84□□□□□ -1.95
PNKPQ96T60 AC004386.2-201ENST00000441858 148 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 HSPE1P18-201ENST00000517602 280 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.84□□□□□ -1.95
PNKPQ96T60 AC103810.1-201ENST00000579873 453 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 RPL30P11-203ENST00000598995 310 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 AL137847.3-201ENST00000611521 109 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 AC127459.3-201ENST00000624328 466 ntBASIC2.84□□□□□ -1.95
PNKPQ96T60 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PNKPQ96T60 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.84□□□□□ -1.95
PNKPQ96T60 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PNKPQ96T60 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PNKPQ96T60 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.83□□□□□ -1.96
PNKPQ96T60 AC103988.1-201ENST00000566382 2177 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 RNU1-62P-201ENST00000362599 164 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 SNORA18.2-201ENST00000383865 132 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 Y_RNA.515-201ENST00000384535 112 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 RNA5SP181-201ENST00000410246 98 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 RNU2-14P-201ENST00000411053 191 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.83□□□□□ -1.96
PNKPQ96T60 RAB28P5-201ENST00000427490 651 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.83□□□□□ -1.96
PNKPQ96T60 AC074133.1-201ENST00000515696 183 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 RNU6-966P-201ENST00000516479 104 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 MIR4643-201ENST00000577473 78 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 AC005562.2-201ENST00000618264 111 ntBASIC2.83□□□□□ -1.96
PNKPQ96T60 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PNKPQ96T60 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PNKPQ96T60 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PNKPQ96T60 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PNKPQ96T60 Y_RNA.331-201ENST00000365267 102 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 Y_RNA.415-201ENST00000384012 112 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 Y_RNA.446-201ENST00000384178 104 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 Y_RNA.569-201ENST00000384749 103 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PNKPQ96T60 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.82□□□□□ -1.96
PNKPQ96T60 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.82□□□□□ -1.96
PNKPQ96T60 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.82□□□□□ -1.96
PNKPQ96T60 RPL31P41-201ENST00000477967 372 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 AC026241.1-201ENST00000517873 2142 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 CYCSP23-201ENST00000519781 313 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.82□□□□□ -1.96
PNKPQ96T60 AP002001.1-203ENST00000534002 267 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.82□□□□□ -1.96
PNKPQ96T60 MIR5006-201ENST00000583027 110 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 AC008739.2-201ENST00000597006 317 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 AC008749.1-201ENST00000597650 306 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 TCL6_2.1-201ENST00000615162 119 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 AC006001.4-201ENST00000622243 395 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.82□□□□□ -1.96
PNKPQ96T60 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.82□□□□□ -1.96
PNKPQ96T60 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.81□□□□□ -1.96
PNKPQ96T60 Y_RNA.101-201ENST00000363154 102 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 Y_RNA.269-201ENST00000364685 89 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 SNORD87-201ENST00000364849 89 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 SNORA72.2-201ENST00000365028 127 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 RNU6-1083P-201ENST00000384022 107 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 SNORA53-201ENST00000391141 249 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 RNU6-1328P-201ENST00000410938 106 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 RPL19P1-201ENST00000411635 428 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 AC140059.1-201ENST00000489238 361 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.81□□□□□ -1.96
PNKPQ96T60 RNU2-44P-201ENST00000516795 194 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 RNU2-31P-201ENST00000516954 155 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.81□□□□□ -1.96
PNKPQ96T60 AC026470.2-201ENST00000561492 181 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.81□□□□□ -1.96
PNKPQ96T60 MIR4435-1-201ENST00000582552 80 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 AL670379.2-201ENST00000604983 252 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 AC004467.1-201ENST00000615678 330 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 U2.14-201ENST00000615943 113 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 AC091932.3-201ENST00000624223 323 ntBASIC2.81□□□□□ -1.96
PNKPQ96T60 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.81□□□□□ -1.96
PNKPQ96T60 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.81□□□□□ -1.96
PNKPQ96T60 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PNKPQ96T60 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.81□□□□□ -1.96
PNKPQ96T60 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PNKPQ96T60 RNA5SP139-201ENST00000364340 117 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 RNU6-326P-201ENST00000365480 107 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 AL390729.2-201ENST00000416137 156 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.8□□□□□ -1.96
PNKPQ96T60 MRPS10P1-201ENST00000448483 130 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.8□□□□□ -1.96
PNKPQ96T60 AC096725.1-201ENST00000514266 313 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 RNA5SP112-201ENST00000515937 99 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 RNU6-138P-201ENST00000515952 107 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 RNU1-117P-201ENST00000517041 158 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.8□□□□□ -1.96
PNKPQ96T60 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.8□□□□□ -1.96
PNKPQ96T60 AC022441.3-201ENST00000605737 136 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 BX284668.6-201ENST00000606899 438 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.8□□□□□ -1.96
PNKPQ96T60 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PNKPQ96T60 AC090517.3-201ENST00000625170 141 ntBASIC2.8□□□□□ -1.96
PNKPQ96T60 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PNKPQ96T60 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PNKPQ96T60 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
PNKPQ96T60 RNU6-1027P-201ENST00000383998 107 ntBASIC2.79□□□□□ -1.96
PNKPQ96T60 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
PNKPQ96T60 RPL23AP36-201ENST00000413895 458 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms