Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.08□□□□□ -2.58
CFAP43Q8NDM7 AC078795.3-201ENST00000602913 472 ntBASIC-1.08□□□□□ -2.58
CFAP43Q8NDM7 SNORA12.1-201ENST00000390873 148 ntBASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 AC092427.1-201ENST00000439177 601 ntBASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 AP000870.1-201ENST00000472927 406 ntBASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 SNORD111.1-201ENST00000516421 86 ntBASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 TMF1P1-201ENST00000576058 373 ntBASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 AC007684.1-201ENST00000609671 477 ntBASIC-1.09□□□□□ -2.58
CFAP43Q8NDM7 SNORA36.1-201ENST00000363424 132 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 RNU6-701P-201ENST00000384059 107 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 SNORD100-201ENST00000408573 76 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 MTCO2P23-201ENST00000425216 680 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 MTCO1P20-201ENST00000425366 358 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 AC245047.3-201ENST00000429428 127 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 RNU7-94P-201ENST00000459576 63 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 AC079382.1-201ENST00000493346 557 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 AC107401.1-201ENST00000503426 685 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 SNORA27.4-201ENST00000516650 95 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 AC131159.1-201ENST00000621854 213 ntBASIC-1.1□□□□□ -2.58
CFAP43Q8NDM7 SNORA72.1-201ENST00000363485 129 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 SNORA33-201ENST00000363664 130 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 SNORD32A-201ENST00000364805 84 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 U8.16-201ENST00000391279 133 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 SPINT5P-201ENST00000448174 155 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 AL357080.1-201ENST00000617394 239 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 AP000676.3-201ENST00000623299 569 ntBASIC-1.1□□□□□ -2.59
CFAP43Q8NDM7 RNU6-480P-201ENST00000384332 107 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 RNA5SP201-201ENST00000410316 124 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 AC007327.1-201ENST00000447461 264 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 AC107297.1-201ENST00000459991 176 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 AC091135.1-201ENST00000585943 307 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 AC012507.3-201ENST00000603556 477 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.11□□□□□ -2.59
CFAP43Q8NDM7 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 MRPL42P3-201ENST00000401492 326 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 AL049545.1-201ENST00000401856 572 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 MTCYBP2-201ENST00000407745 171 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 MIR1253-201ENST00000408273 105 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 ELOCP21-201ENST00000412558 336 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 CDK8P2-201ENST00000415020 547 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 AC007969.2-201ENST00000441891 191 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 MIR3923-201ENST00000579521 83 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 AC246785.4-201ENST00000605374 287 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 AL354696.1-201ENST00000614652 497 ntBASIC-1.12□□□□□ -2.59
CFAP43Q8NDM7 SNORD114-14-201ENST00000362723 75 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNU4-56P-201ENST00000364700 142 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNU7-59P-201ENST00000459101 61 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNU2-34P-201ENST00000516534 121 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 SNORA43.2-201ENST00000516652 128 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNU2-60P-201ENST00000517290 128 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 AC026616.1-201ENST00000523157 525 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 ZNF321P-202ENST00000550843 495 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 MIR3165-201ENST00000579874 75 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 AC090897.1-201ENST00000580909 226 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 SNORA28-201ENST00000606769 126 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 U6.108-201ENST00000637764 58 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNU6-216P-201ENST00000363282 104 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNA5SP117-201ENST00000365294 118 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 EEF1E1P1-201ENST00000446998 430 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 SCARNA17-201ENST00000516183 144 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 MTND1P36-201ENST00000522384 936 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 MTCO3P15-201ENST00000526563 574 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 AC087883.1-201ENST00000551882 391 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 MIR6738-201ENST00000619620 64 ntBASIC-1.13□□□□□ -2.59
CFAP43Q8NDM7 RNU6-424P-201ENST00000384367 105 ntBASIC-1.14□□□□□ -2.59
CFAP43Q8NDM7 MIR520C-201ENST00000385005 87 ntBASIC-1.14□□□□□ -2.59
CFAP43Q8NDM7 MTCO3P27-201ENST00000514397 196 ntBASIC-1.14□□□□□ -2.59
CFAP43Q8NDM7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.14□□□□□ -2.59
CFAP43Q8NDM7 AC023824.3-201ENST00000569003 562 ntBASIC-1.14□□□□□ -2.59
CFAP43Q8NDM7 MIR4432-201ENST00000581823 84 ntBASIC-1.14□□□□□ -2.59
CFAP43Q8NDM7 RNU4-30P-201ENST00000410245 143 ntBASIC-1.15□□□□□ -2.59
CFAP43Q8NDM7 AL953862.1-201ENST00000423016 168 ntBASIC-1.15□□□□□ -2.59
CFAP43Q8NDM7 AC091885.1-201ENST00000506658 268 ntBASIC-1.15□□□□□ -2.59
CFAP43Q8NDM7 VN1R87P-201ENST00000596706 487 ntBASIC-1.15□□□□□ -2.59
CFAP43Q8NDM7 RNU6-278P-201ENST00000390945 109 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 AC006366.1-201ENST00000422002 759 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 MTCYBP39-201ENST00000437562 491 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 SCARNA18-201ENST00000459004 134 ntBASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-1.16□□□□□ -2.59
CFAP43Q8NDM7 AC090517.1-201ENST00000569307 266 ntBASIC-1.16□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms