Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 AC018634.1-201ENST00000437554 401 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 AC010095.1-201ENST00000443543 144 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 RNU6-221P-201ENST00000459541 99 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.11□□□□□ -2.07
ABCD3P28288 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 RNU6-1146P-201ENST00000516282 102 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 Y_RNA.675-201ENST00000516389 149 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.11□□□□□ -2.07
ABCD3P28288 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 AL109918.3-201ENST00000603072 338 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.11□□□□□ -2.07
ABCD3P28288 AL590808.1-201ENST00000618696 141 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 MIR6766-201ENST00000622641 72 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 SNORD87-201ENST00000364849 89 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 RNU5E-4P-201ENST00000364931 120 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 MIR329-1-201ENST00000385028 80 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 MIR559-201ENST00000385188 96 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 RNU6-57P-201ENST00000411348 103 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.1□□□□□ -2.07
ABCD3P28288 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.1□□□□□ -2.07
ABCD3P28288 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.1□□□□□ -2.07
ABCD3P28288 YWHAEP4-201ENST00000505390 198 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.1□□□□□ -2.07
ABCD3P28288 AC008413.1-201ENST00000511864 177 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 AC011406.1-201ENST00000512440 370 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 RNU6-120P-201ENST00000516077 103 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 RN7SKP49-201ENST00000516675 260 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 AC022868.1-201ENST00000517767 391 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.1□□□□□ -2.07
ABCD3P28288 RAB11AP2-201ENST00000545905 639 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 MIR4795-201ENST00000584182 89 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 AL117336.2-201ENST00000602435 335 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.1□□□□□ -2.07
ABCD3P28288 AL162373.1-201ENST00000620433 407 ntBASIC2.1□□□□□ -2.07
ABCD3P28288 Y_RNA.315-201ENST00000365117 102 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 SNORA8-201ENST00000384574 139 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 MIR548B-201ENST00000385247 97 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 MIR1185-2-201ENST00000408687 86 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 Y_RNA.592-201ENST00000410274 109 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 AC060773.1-201ENST00000421698 310 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 TOMM22P2-201ENST00000430735 237 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 AC074133.1-201ENST00000515696 183 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 AC104984.5-201ENST00000586878 94 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.09□□□□□ -2.07
ABCD3P28288 AL773524.1-201ENST00000614065 229 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 AC087588.2-201ENST00000617667 426 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 AC022513.1-201ENST00000624512 117 ntBASIC2.09□□□□□ -2.07
ABCD3P28288 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.09□□□□□ -2.08
ABCD3P28288 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
ABCD3P28288 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
ABCD3P28288 RNU4-79P-201ENST00000362764 141 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 RNU6-1145P-201ENST00000384246 107 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 OOSP1P1-201ENST00000423265 274 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 MTND4P28-201ENST00000426217 387 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.08□□□□□ -2.08
ABCD3P28288 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 RPL23AP6-201ENST00000446637 472 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 UQCRBP2-201ENST00000447827 297 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.08□□□□□ -2.08
ABCD3P28288 MIR3945-201ENST00000581853 98 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 MIR3124-201ENST00000582636 67 ntBASIC2.08□□□□□ -2.08
ABCD3P28288 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
ABCD3P28288 Y_RNA.314-201ENST00000365114 102 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 Y_RNA.428-201ENST00000384078 102 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 Y_RNA.431-201ENST00000384086 102 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 MIR515-2-201ENST00000384883 83 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 MIR515-1-201ENST00000384884 83 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 Y_RNA.605-201ENST00000410577 105 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 AF228730.4-201ENST00000421457 183 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 CST2P1-201ENST00000425770 87 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.07□□□□□ -2.08
ABCD3P28288 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.07□□□□□ -2.08
ABCD3P28288 U8.22-201ENST00000459141 133 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 AC105758.1-201ENST00000506038 399 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 RNU6-1041P-201ENST00000516254 102 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 RNVU1-2-201ENST00000516326 135 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 RNU6-911P-201ENST00000516523 104 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 AC025647.1-201ENST00000517879 253 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCD3P28288 AK6P2-201ENST00000549020 471 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 AC069114.2-201ENST00000604699 304 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 AC064859.1-201ENST00000624741 174 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ABCD3P28288 MTND5P6-201ENST00000422338 1798 ntBASIC2.07□□□□□ -2.08
ABCD3P28288 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCD3P28288 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
ABCD3P28288 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ABCD3P28288 RNA5SP361-201ENST00000362686 118 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 RNU6-1266P-201ENST00000362794 105 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 snoU2-30.2-201ENST00000362805 70 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 Y_RNA.58-201ENST00000362807 102 ntBASIC2.06□□□□□ -2.08
ABCD3P28288 Y_RNA.154-201ENST00000363624 102 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 240.3 ms