Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 Y_RNA.339-201ENST00000365325 102 ntBASIC2.12□□□□□ -2.07
CD4P01730 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
CD4P01730 RNU6-418P-201ENST00000384035 107 ntBASIC2.12□□□□□ -2.07
CD4P01730 RNU6-842P-201ENST00000384269 107 ntBASIC2.12□□□□□ -2.07
CD4P01730 MIR515-2-201ENST00000384883 83 ntBASIC2.12□□□□□ -2.07
CD4P01730 MIR515-1-201ENST00000384884 83 ntBASIC2.12□□□□□ -2.07
CD4P01730 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CD4P01730 RNU6-1050P-201ENST00000410388 107 ntBASIC2.12□□□□□ -2.07
CD4P01730 BTF3P4-201ENST00000418852 495 ntBASIC2.12□□□□□ -2.07
CD4P01730 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.12□□□□□ -2.07
CD4P01730 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
CD4P01730 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.12□□□□□ -2.07
CD4P01730 SNORD13-201ENST00000459299 104 ntBASIC2.12□□□□□ -2.07
CD4P01730 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.12□□□□□ -2.07
CD4P01730 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.12□□□□□ -2.07
CD4P01730 RNVU1-2-201ENST00000516326 135 ntBASIC2.12□□□□□ -2.07
CD4P01730 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.12□□□□□ -2.07
CD4P01730 SNORA44.1-201ENST00000517031 108 ntBASIC2.12□□□□□ -2.07
CD4P01730 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.12□□□□□ -2.07
CD4P01730 SUB1P4-201ENST00000566062 339 ntBASIC2.12□□□□□ -2.07
CD4P01730 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.12□□□□□ -2.07
CD4P01730 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.12□□□□□ -2.07
CD4P01730 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.12□□□□□ -2.07
CD4P01730 MIR7111-201ENST00000619751 72 ntBASIC2.12□□□□□ -2.07
CD4P01730 AC068205.3-201ENST00000636385 468 ntBASIC2.12□□□□□ -2.07
CD4P01730 CENPCP1-201ENST00000533085 2578 ntBASIC2.12□□□□□ -2.07
CD4P01730 AC245060.5-201ENST00000610778 3293 ntBASIC2.11□□□□□ -2.07
CD4P01730 RNU6-1059P-201ENST00000363752 98 ntBASIC2.11□□□□□ -2.07
CD4P01730 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
CD4P01730 RNU6-700P-201ENST00000391043 107 ntBASIC2.11□□□□□ -2.07
CD4P01730 Y_RNA.594-201ENST00000410373 140 ntBASIC2.11□□□□□ -2.07
CD4P01730 RNU6-321P-201ENST00000410912 106 ntBASIC2.11□□□□□ -2.07
CD4P01730 EBAG9P1-201ENST00000418955 543 ntBASIC2.11□□□□□ -2.07
CD4P01730 AC008134.1-201ENST00000420943 193 ntBASIC2.11□□□□□ -2.07
CD4P01730 AC069257.2-201ENST00000441819 155 ntBASIC2.11□□□□□ -2.07
CD4P01730 DUXAP9-208ENST00000622815 614 ntBASIC2.11□□□□□ -2.07
CD4P01730 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
CD4P01730 MTND4P1-201ENST00000457501 1466 ntBASIC2.1□□□□□ -2.07
CD4P01730 Y_RNA.2-201ENST00000362330 96 ntBASIC2.1□□□□□ -2.07
CD4P01730 RNU6-873P-201ENST00000363833 107 ntBASIC2.1□□□□□ -2.07
CD4P01730 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
CD4P01730 Y_RNA.405-201ENST00000383979 100 ntBASIC2.1□□□□□ -2.07
CD4P01730 Y_RNA.451-201ENST00000384200 100 ntBASIC2.1□□□□□ -2.07
CD4P01730 SNORA67.2-201ENST00000384300 149 ntBASIC2.1□□□□□ -2.07
CD4P01730 Y_RNA.524-201ENST00000384564 100 ntBASIC2.1□□□□□ -2.07
CD4P01730 Y_RNA.561-201ENST00000384694 100 ntBASIC2.1□□□□□ -2.07
CD4P01730 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
CD4P01730 RNA5SP100-201ENST00000410903 110 ntBASIC2.1□□□□□ -2.07
CD4P01730 RNA5SP59-201ENST00000410922 110 ntBASIC2.1□□□□□ -2.07
CD4P01730 AC004866.1-201ENST00000411748 78 ntBASIC2.1□□□□□ -2.07
CD4P01730 RNU6-1114P-201ENST00000516022 107 ntBASIC2.1□□□□□ -2.07
CD4P01730 Y_RNA.691-201ENST00000516611 103 ntBASIC2.1□□□□□ -2.07
CD4P01730 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
CD4P01730 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
CD4P01730 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
CD4P01730 AC022306.2-201ENST00000617563 647 ntBASIC2.1□□□□□ -2.07
CD4P01730 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
CD4P01730 snoZ196.1-201ENST00000625269 89 ntBASIC2.1□□□□□ -2.07
CD4P01730 AC099654.14-201ENST00000638599 341 ntBASIC2.1□□□□□ -2.07
CD4P01730 RNU6-661P-201ENST00000362409 107 ntBASIC2.09□□□□□ -2.07
CD4P01730 U3.8-201ENST00000363675 217 ntBASIC2.09□□□□□ -2.07
CD4P01730 SNORA72.2-201ENST00000365028 127 ntBASIC2.09□□□□□ -2.07
CD4P01730 RNU6-1283P-201ENST00000365314 105 ntBASIC2.09□□□□□ -2.07
CD4P01730 RNU6-793P-201ENST00000384233 104 ntBASIC2.09□□□□□ -2.07
CD4P01730 MIR549A-201ENST00000385268 96 ntBASIC2.09□□□□□ -2.07
CD4P01730 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
CD4P01730 MTCYBP10-201ENST00000424905 650 ntBASIC2.09□□□□□ -2.07
CD4P01730 CST2P1-201ENST00000425770 87 ntBASIC2.09□□□□□ -2.07
CD4P01730 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.09□□□□□ -2.07
CD4P01730 Y_RNA.635-201ENST00000459041 101 ntBASIC2.09□□□□□ -2.07
CD4P01730 RNU7-57P-201ENST00000459540 60 ntBASIC2.09□□□□□ -2.07
CD4P01730 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.09□□□□□ -2.07
CD4P01730 AC011406.1-201ENST00000512440 370 ntBASIC2.09□□□□□ -2.07
CD4P01730 SNORA25.15-201ENST00000516487 89 ntBASIC2.09□□□□□ -2.07
CD4P01730 CYCSP23-201ENST00000519781 313 ntBASIC2.09□□□□□ -2.07
CD4P01730 CBX3P8-201ENST00000532412 525 ntBASIC2.09□□□□□ -2.07
CD4P01730 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.09□□□□□ -2.07
CD4P01730 AC022513.1-201ENST00000624512 117 ntBASIC2.09□□□□□ -2.07
CD4P01730 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
CD4P01730 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CD4P01730 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CD4P01730 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
CD4P01730 Y_RNA.88-201ENST00000363029 99 ntBASIC2.08□□□□□ -2.08
CD4P01730 RNU6-1019P-201ENST00000364424 107 ntBASIC2.08□□□□□ -2.08
CD4P01730 MIR487A-201ENST00000385009 80 ntBASIC2.08□□□□□ -2.08
CD4P01730 RNU1-139P-201ENST00000391307 165 ntBASIC2.08□□□□□ -2.08
CD4P01730 AL627390.1-201ENST00000396055 340 ntBASIC2.08□□□□□ -2.08
CD4P01730 USP9YP16-201ENST00000430287 407 ntBASIC2.08□□□□□ -2.08
CD4P01730 RPL23AP7-203ENST00000449021 469 ntBASIC2.08□□□□□ -2.08
CD4P01730 USP9YP23-201ENST00000455085 407 ntBASIC2.08□□□□□ -2.08
CD4P01730 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.08□□□□□ -2.08
CD4P01730 AC093303.1-201ENST00000514549 295 ntBASIC2.08□□□□□ -2.08
CD4P01730 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
CD4P01730 RNU1-117P-201ENST00000517041 158 ntBASIC2.08□□□□□ -2.08
CD4P01730 MIR5094-201ENST00000578766 85 ntBASIC2.08□□□□□ -2.08
CD4P01730 MIR5701-3-201ENST00000578890 82 ntBASIC2.08□□□□□ -2.08
CD4P01730 MIR5701-1-201ENST00000585138 82 ntBASIC2.08□□□□□ -2.08
CD4P01730 MIR5701-2-201ENST00000615634 82 ntBASIC2.08□□□□□ -2.08
CD4P01730 AC084768.2-201ENST00000622736 221 ntBASIC2.08□□□□□ -2.08
CD4P01730 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms