Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 RNU1-117P-201ENST00000517041 158 ntBASIC1.2□□□□□ -2.22
RAMP3O60896 PIGPP4-201ENST00000584447 307 ntBASIC1.2□□□□□ -2.22
RAMP3O60896 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.2□□□□□ -2.22
RAMP3O60896 AP003465.2-201ENST00000602571 373 ntBASIC1.2□□□□□ -2.22
RAMP3O60896 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
RAMP3O60896 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.2□□□□□ -2.22
RAMP3O60896 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
RAMP3O60896 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
RAMP3O60896 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 RNU1-42P-201ENST00000364033 160 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 Y_RNA.373-201ENST00000365600 103 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 RNU6-950P-201ENST00000384651 107 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 MIR194-1-201ENST00000384892 85 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
RAMP3O60896 AL590002.1-201ENST00000406554 418 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 AC004965.1-201ENST00000413033 213 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 EIF1P1-201ENST00000421436 341 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 AL354695.1-201ENST00000427935 228 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.19□□□□□ -2.22
RAMP3O60896 DAP3P1-201ENST00000441522 278 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 MTND1P1-201ENST00000445453 368 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 MTND1P29-201ENST00000448112 647 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 RPS26P45-201ENST00000471748 340 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 HMGN1P12-201ENST00000499125 195 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.19□□□□□ -2.22
RAMP3O60896 RNA5SP61-201ENST00000516453 100 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 ZNF519P2-201ENST00000557032 169 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 AC005668.1-201ENST00000571142 476 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 POLR3GP2-201ENST00000588366 668 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 AL078604.3-201ENST00000615580 211 ntBASIC1.19□□□□□ -2.22
RAMP3O60896 SNORD50.1-201ENST00000362987 71 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 SNORD115-8-201ENST00000363856 82 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 SNORD115-32-201ENST00000364079 82 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 SNORD115-38-201ENST00000365037 82 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 SNORA4.2-201ENST00000365313 147 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 RNU6-483P-201ENST00000384088 108 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 SNORD116-2-201ENST00000384274 95 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 SNORA67.2-201ENST00000384300 149 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 Y_RNA.530-201ENST00000384587 101 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 SNORD116-6-201ENST00000384711 96 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
RAMP3O60896 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RAMP3O60896 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.18□□□□□ -2.22
RAMP3O60896 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.18□□□□□ -2.22
RAMP3O60896 AC079354.2-201ENST00000453523 154 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 RPL30P7-201ENST00000479312 323 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.18□□□□□ -2.22
RAMP3O60896 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.18□□□□□ -2.22
RAMP3O60896 AC097065.2-201ENST00000608159 533 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.18□□□□□ -2.22
RAMP3O60896 Y_RNA.151-201ENST00000363566 112 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 Y_RNA.287-201ENST00000364853 94 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 RNU6-1240P-201ENST00000365155 104 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 Y_RNA.372-201ENST00000365599 102 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 MIR32-201ENST00000384965 70 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 MIR487A-201ENST00000385009 80 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 RNU6-780P-201ENST00000391030 104 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.17□□□□□ -2.22
RAMP3O60896 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.17□□□□□ -2.22
RAMP3O60896 RNU6-221P-201ENST00000459541 99 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 RPL31P58-201ENST00000469001 379 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 MTCO2P30-201ENST00000503662 364 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.17□□□□□ -2.22
RAMP3O60896 Y_RNA.704-201ENST00000516851 102 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 MTND1P5-201ENST00000517906 940 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 RAB11AP2-201ENST00000545905 639 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 AL161670.1-201ENST00000554348 137 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 AC015720.1-201ENST00000565251 277 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 MIR8070-201ENST00000616510 88 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 AC006504.8-201ENST00000621046 635 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 AC099654.12-201ENST00000639868 649 ntBASIC1.17□□□□□ -2.22
RAMP3O60896 Y_RNA.319-201ENST00000365138 92 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 Y_RNA.559-201ENST00000384686 107 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 RNU6-95P-201ENST00000384697 107 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 MIR513A1-201ENST00000385138 129 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 MIR153-2-201ENST00000385225 87 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 RNU6-908P-201ENST00000410160 94 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 Y_RNA.615-201ENST00000410769 117 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 AC016909.1-201ENST00000415916 166 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.16□□□□□ -2.22
RAMP3O60896 SNX2P2-201ENST00000424553 323 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 MTCO3P18-201ENST00000440206 761 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.16□□□□□ -2.22
RAMP3O60896 HMGN2P26-201ENST00000463169 339 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 ACA59.1-201ENST00000515966 143 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 RNU1-142P-201ENST00000516682 145 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 AC025647.1-201ENST00000517879 253 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.16□□□□□ -2.22
RAMP3O60896 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 AC040896.1-201ENST00000613819 479 ntBASIC1.16□□□□□ -2.22
RAMP3O60896 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
RAMP3O60896 RNU6-1123P-201ENST00000362347 106 ntBASIC1.15□□□□□ -2.23
RAMP3O60896 RNU1-62P-201ENST00000362599 164 ntBASIC1.15□□□□□ -2.23
RAMP3O60896 RNU6-1252P-201ENST00000363054 104 ntBASIC1.15□□□□□ -2.23
RAMP3O60896 RNU5F-3P-201ENST00000363767 117 ntBASIC1.15□□□□□ -2.23
RAMP3O60896 RNU4-13P-201ENST00000364019 141 ntBASIC1.15□□□□□ -2.23
RAMP3O60896 MIR517A-201ENST00000385001 87 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 506.9 ms