Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL355073.2-201ENST00000612106 557 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC093913.1-201ENST00000614178 329 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR5701-2-201ENST00000615634 82 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC233981.2-201ENST00000611524 1614 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORD115-8-201ENST00000363856 82 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-595P-201ENST00000363944 107 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-743P-201ENST00000364151 106 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORD115-38-201ENST00000365037 82 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNY3P14-201ENST00000384309 102 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-933P-201ENST00000384424 107 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.594-201ENST00000410373 140 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNA5SP450-201ENST00000411206 102 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC074085.1-201ENST00000413598 418 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPL31P58-201ENST00000469001 379 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 MTND4P17-201ENST00000470444 350 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC027288.2-201ENST00000553028 243 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR3126-201ENST00000577443 74 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC005014.2-201ENST00000607795 599 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 MTND5P9-201ENST00000503854 1755 ntBASIC1.39□□□□□ -2.19
TMX2-CTNND1H3BSU7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.48-201ENST00000362710 103 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORD115-32-201ENST00000364079 82 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORA18.2-201ENST00000383865 132 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-17P-201ENST00000384245 107 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-18P-201ENST00000384527 107 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNA5SP212-201ENST00000391223 107 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 MTCO1P44-201ENST00000441935 243 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNA5SP384-201ENST00000516615 116 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 CBX3P8-201ENST00000532412 525 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC090517.1-201ENST00000569307 266 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR3169-201ENST00000578032 83 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR4801-201ENST00000582704 82 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AP000654.2-201ENST00000605633 586 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 BX322639.1-202ENST00000423987 2213 ntBASIC1.38□□□□□ -2.19
TMX2-CTNND1H3BSU7 MTND4P12-201ENST00000498999 1377 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-874P-201ENST00000362390 105 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU4-56P-201ENST00000364700 142 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.482-201ENST00000384377 111 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORD14D-201ENST00000384390 87 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-1050P-201ENST00000410388 107 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNA5SP504-201ENST00000410676 117 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL590556.1-201ENST00000423231 483 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 MTND3P10-201ENST00000450967 341 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 MTCO3P8-201ENST00000453691 755 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC016925.1-201ENST00000458303 298 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC091951.2-201ENST00000500762 203 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 ACA59.1-201ENST00000515966 143 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-277P-201ENST00000516272 106 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-1016P-201ENST00000516689 94 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-58P-201ENST00000517143 103 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 TPTEP1-208ENST00000636884 213 ntBASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TMX2-CTNND1H3BSU7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.122-201ENST00000363331 96 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORA72.1-201ENST00000363485 129 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-593P-201ENST00000364716 112 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU4-9P-201ENST00000364951 139 ntBASIC1.36□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORD31B-201ENST00000364977 69 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms