Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 MIR561-201ENST00000385216 97 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 RPS20P10-201ENST00000451209 253 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 AC006483.1-201ENST00000487308 313 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 ATP5EP1-201ENST00000510257 156 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 RNU6-965P-201ENST00000516721 96 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 AC025754.2-201ENST00000606491 432 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 AC015813.4-201ENST00000610469 179 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 AC013791.1-201ENST00000616619 62 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 AC006435.5-201ENST00000624486 112 ntBASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMEM88BA6NKF7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 SNORD74.4-201ENST00000364129 80 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 SNORA71.1-201ENST00000364523 117 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 SNORA72.4-201ENST00000384174 132 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 ARF4P2-201ENST00000430209 526 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 HSPE1P13-201ENST00000451143 297 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 Y_RNA.637-201ENST00000459424 114 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 UBL5P2-201ENST00000583788 219 ntBASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.84□□□□□ -1.79
TMEM88BA6NKF7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TMEM88BA6NKF7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 Y_RNA.7-201ENST00000362352 102 ntBASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 RNU6-653P-201ENST00000363074 106 ntBASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 Y_RNA.240-201ENST00000364469 95 ntBASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 SNORA7.4-201ENST00000384249 137 ntBASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 MIR93-201ENST00000385024 80 ntBASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 PCNPP3-201ENST00000393579 471 ntBASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 RNY3P16-201ENST00000516338 101 ntBASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TMEM88BA6NKF7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 RNU6-801P-201ENST00000364087 105 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 Y_RNA.293-201ENST00000364908 93 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 SNORD14D-201ENST00000384390 87 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 MIR504-201ENST00000385065 83 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 MTCO2P33-201ENST00000402100 465 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 AL355497.1-201ENST00000406262 551 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 AL139132.1-201ENST00000431587 344 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 MTND2P29-201ENST00000438595 412 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 RPL23AP7-203ENST00000449021 469 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 HMGN2P18-201ENST00000450680 270 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 AC108938.1-201ENST00000451204 136 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 AL137159.1-201ENST00000452808 512 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 RPS4XP2-201ENST00000458402 793 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 AC010469.1-201ENST00000463864 576 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 RN7SL330P-201ENST00000469709 307 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 HMGB3P3-201ENST00000510526 400 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 SNORA4.4-201ENST00000515921 135 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 RNU6-1212P-201ENST00000517023 104 ntBASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM88BA6NKF7 AC138915.1-201ENST00000565427 1685 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 AC062016.1-201ENST00000355719 319 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 MIR448-201ENST00000362131 111 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 Y_RNA.121-201ENST00000363309 113 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 SNORA8.3-201ENST00000384679 139 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 AC022018.1-201ENST00000430685 241 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 RN7SKP132-201ENST00000516001 208 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 RNU1-41P-201ENST00000516161 162 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 RNU1-48P-201ENST00000516400 162 ntBASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.81□□□□□ -1.8
TMEM88BA6NKF7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.8□□□□□ -1.8
TMEM88BA6NKF7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
TMEM88BA6NKF7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88BA6NKF7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM88BA6NKF7 RNA5SP42-201ENST00000364278 115 ntBASIC3.8□□□□□ -1.8
TMEM88BA6NKF7 RNU6-144P-201ENST00000383951 107 ntBASIC3.8□□□□□ -1.8
TMEM88BA6NKF7 SNORA70B-201ENST00000384210 135 ntBASIC3.8□□□□□ -1.8
TMEM88BA6NKF7 SNORA20B-201ENST00000384220 132 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms