Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MTCO1P44-201ENST00000441935 243 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC007215.1-201ENST00000464893 276 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 MTND5P5-201ENST00000503764 376 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-237P-201ENST00000515985 71 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 RNVU1-2-201ENST00000516326 135 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC005668.1-201ENST00000571142 476 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 7SK.7-201ENST00000603504 247 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC083806.3-201ENST00000614016 455 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 AC084768.2-201ENST00000622736 221 ntBASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ATG4BQ9Y4P1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 MIR1283-1-201ENST00000408494 87 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 AC009237.7-201ENST00000447357 229 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 snoU13.30-201ENST00000458951 104 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 RPL30P10-201ENST00000488148 337 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 AC067942.3-201ENST00000512025 362 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 RNU1-117P-201ENST00000517041 158 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 RRN3P3-201ENST00000549207 578 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 AC022513.1-201ENST00000624512 117 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 AL159152.1-201ENST00000635019 2587 ntBASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-842P-201ENST00000384269 107 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 MIR153-2-201ENST00000385225 87 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-174P-201ENST00000410406 106 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC016717.1-201ENST00000448918 286 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC107399.1-201ENST00000451226 265 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC027575.1-201ENST00000481064 460 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC097473.1-201ENST00000508142 408 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 RNU7-30P-201ENST00000516835 62 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 SUMO2P18-201ENST00000518873 252 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AP003033.1-201ENST00000527244 415 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 MIR8081-201ENST00000611533 95 ntBASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.63□□□□□ -2.15
ATG4BQ9Y4P1 BX322639.1-202ENST00000423987 2213 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-767P-201ENST00000384132 107 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-482P-201ENST00000391068 107 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 MIR548K-201ENST00000408406 116 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 AC074085.1-201ENST00000413598 418 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 AC243428.1-201ENST00000421099 264 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 MTCO3P29-201ENST00000432119 779 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 SNORD5.1-201ENST00000458800 75 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 SNORA25.14-201ENST00000516481 132 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-856P-201ENST00000516959 98 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 MIR5696-201ENST00000578474 85 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 MIR5094-201ENST00000578766 85 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 AL353997.5-201ENST00000618886 171 ntBASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
ATG4BQ9Y4P1 ZNF299P-201ENST00000406845 1804 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 RNA5SP99-201ENST00000364020 114 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 SNORD115-32-201ENST00000364079 82 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-596P-201ENST00000365395 98 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-601P-201ENST00000384540 107 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 RNU7-175P-201ENST00000515915 61 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-1041P-201ENST00000516254 102 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 RNA5SP54-201ENST00000516951 92 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 RNU6-58P-201ENST00000517143 103 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 AL590705.4-201ENST00000532209 134 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 CBX3P8-201ENST00000532412 525 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 UBL5P4-201ENST00000562584 236 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 AC018462.2-201ENST00000605375 395 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 AL353149.1-201ENST00000610667 244 ntBASIC1.61□□□□□ -2.15
ATG4BQ9Y4P1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ATG4BQ9Y4P1 ZNF72P-201ENST00000425869 1908 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms