Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MIR1252-201ENST00000408861 65 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.592-201ENST00000410274 109 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 Z82188.1-201ENST00000436709 154 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC018868.1-201ENST00000491307 315 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 SNORA4.4-201ENST00000515921 135 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 RNU7-4P-201ENST00000516961 62 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.715-201ENST00000517082 110 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC034114.1-201ENST00000520293 285 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 MRPS36P4-201ENST00000534436 298 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC104581.2-201ENST00000572227 430 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 MIR3149-201ENST00000584629 83 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC010928.2-201ENST00000588017 287 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 VN1R91P-201ENST00000594377 169 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC016727.2-201ENST00000603988 621 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AL355297.3-201ENST00000604082 446 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AL159153.1-201ENST00000619688 317 ntBASIC2.31□□□□□ -2.04
DDX43Q9NXZ2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.149-201ENST00000363558 117 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.380-201ENST00000365663 111 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 RNU6-505P-201ENST00000384427 107 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 MIR625-201ENST00000385047 85 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 AL358453.1-201ENST00000422522 250 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 AC092423.1-201ENST00000430165 186 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 RPL39P29-201ENST00000447779 157 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 RPL30P1-201ENST00000488676 339 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 MRPS35P2-201ENST00000508242 191 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 RNU6-911P-201ENST00000516523 104 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 RNA5SP137-201ENST00000516833 135 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 AC040926.1-201ENST00000530195 238 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 AL590705.4-201ENST00000532209 134 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 HSBP1P1-201ENST00000555205 166 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 AC006600.1-201ENST00000572529 153 ntBASIC2.3□□□□□ -2.04
DDX43Q9NXZ2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 SNORD14.1-201ENST00000365609 90 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.405-201ENST00000383979 100 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.451-201ENST00000384200 100 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 RNU6-708P-201ENST00000384217 107 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.512-201ENST00000384518 102 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 RNU6-1274P-201ENST00000384557 107 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.524-201ENST00000384564 100 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.561-201ENST00000384694 100 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 RNU6-1245P-201ENST00000411130 106 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AL731563.1-201ENST00000442202 214 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AC073910.1-201ENST00000445047 438 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 RN7SKP210-201ENST00000459176 261 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 RNU7-169P-201ENST00000459456 61 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 RNU6-635P-201ENST00000516651 102 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AC131281.1-201ENST00000522984 164 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AC004817.2-201ENST00000561794 651 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AC124312.5-201ENST00000604451 268 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AL138825.1-201ENST00000618587 192 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 U2.1-201ENST00000618978 145 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 AL450472.1-202ENST00000637286 180 ntBASIC2.29□□□□□ -2.04
DDX43Q9NXZ2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.176-201ENST00000363815 109 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.214-201ENST00000364201 112 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.276-201ENST00000364732 109 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 RNA5SP37-201ENST00000365420 130 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 Y_RNA.424-201ENST00000384063 103 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 RNU6-700P-201ENST00000391043 107 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 SNORA48.3-201ENST00000391081 134 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 MIR190B-201ENST00000401119 79 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 MTCYBP2-201ENST00000407745 171 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 AC007098.1-201ENST00000420122 367 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 HMGN2P38-201ENST00000423806 265 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 FCF1P4-201ENST00000448326 183 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 OR2AQ1P-201ENST00000451972 200 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 U8.22-201ENST00000459141 133 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 RPL23AP75-201ENST00000491601 451 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 AF186996.7-201ENST00000492781 209 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 AC090255.1-201ENST00000495779 349 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 SNORA31.25-201ENST00000517242 134 ntBASIC2.28□□□□□ -2.04
DDX43Q9NXZ2 IGKV3-31-201ENST00000523109 329 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms