Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC006504.8-201ENST00000621046 635 ntBASIC1.34□□□□□ -2.19
CDC42EP4Q9H3Q1 AC100810.6-201ENST00000638068 285 ntBASIC1.34□□□□□ -2.19
CDC42EP4Q9H3Q1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CDC42EP4Q9H3Q1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 CBX3P1-201ENST00000325243 554 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-438P-201ENST00000365561 103 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-790P-201ENST00000384479 105 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR934-201ENST00000401241 83 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR1277-201ENST00000408536 78 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 MTND1P4-201ENST00000435196 415 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AL353572.1-201ENST00000442490 417 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC026470.2-201ENST00000561492 181 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC005786.1-201ENST00000588553 154 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC068790.6-201ENST00000602558 258 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AC007014.2-201ENST00000615581 479 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR8070-201ENST00000616510 88 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 SCARNA4-201ENST00000629045 128 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 MTND5P9-201ENST00000503854 1755 ntBASIC1.33□□□□□ -2.2
CDC42EP4Q9H3Q1 AL391987.6-201ENST00000305671 199 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-545P-201ENST00000362681 104 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR487A-201ENST00000385009 80 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR549A-201ENST00000385268 96 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 RNA5SP100-201ENST00000410903 110 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 RNA5SP59-201ENST00000410922 110 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 AC009161.1-201ENST00000417306 376 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 AC007395.1-201ENST00000451333 677 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 AC008834.1-201ENST00000511612 175 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR4713-201ENST00000582691 75 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 POLR3GP2-201ENST00000588366 668 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 AC002553.4-201ENST00000616896 331 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-192P-201ENST00000391253 100 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AL033519.2-201ENST00000403958 392 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 FCF1P9-201ENST00000412546 282 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 EIF1P1-201ENST00000421436 341 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 Z82188.1-201ENST00000436709 154 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC004386.2-201ENST00000441858 148 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC009237.7-201ENST00000447357 229 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 MTND1P17-201ENST00000448961 204 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 MTCO3P8-201ENST00000453691 755 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 SUB1P4-201ENST00000566062 339 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC018638.8-201ENST00000588755 281 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC080078.2-201ENST00000603766 501 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AP000907.4-201ENST00000604143 237 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC010900.2-201ENST00000604508 210 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC124303.1-201ENST00000605703 360 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC019193.3-201ENST00000609144 554 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 AC137590.2-201ENST00000619709 240 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 BX322639.1-202ENST00000423987 2213 ntBASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDC42EP4Q9H3Q1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 SNORD115-8-201ENST00000363856 82 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 SNORD115-32-201ENST00000364079 82 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 SNORD115-38-201ENST00000365037 82 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-306P-201ENST00000384617 107 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR300-201ENST00000401138 83 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 MIR1283-1-201ENST00000408494 87 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 AC004965.1-201ENST00000413033 213 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 AC069439.1-201ENST00000494739 167 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU6-273P-201ENST00000516937 96 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
CDC42EP4Q9H3Q1 RNA5SP454-201ENST00000517231 127 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms