Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.37□□□□□ -2.03
PKP4Q99569 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PKP4Q99569 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PKP4Q99569 Y_RNA.26-201ENST00000362539 101 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU6-1301P-201ENST00000362724 104 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU6-1010P-201ENST00000362757 107 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU6-137P-201ENST00000363680 108 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU6-1318P-201ENST00000365389 103 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU1-148P-201ENST00000384472 162 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU6-541P-201ENST00000384709 110 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 SNORA26.3-201ENST00000391119 136 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU1-139P-201ENST00000391307 165 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 AC009963.1-201ENST00000417265 157 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.36□□□□□ -2.03
PKP4Q99569 LINC01399-202ENST00000458450 244 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.36□□□□□ -2.03
PKP4Q99569 RNU6-1114P-201ENST00000516022 107 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU2-53P-201ENST00000516257 147 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 RNU6-794P-201ENST00000517261 64 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.36□□□□□ -2.03
PKP4Q99569 AC115990.1-201ENST00000526957 301 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 MIR3668-201ENST00000582138 75 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 AC090425.1-201ENST00000610007 140 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
PKP4Q99569 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
PKP4Q99569 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.36□□□□□ -2.03
PKP4Q99569 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PKP4Q99569 AC002543.1-201ENST00000299783 1954 ntBASIC2.36□□□□□ -2.03
PKP4Q99569 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
PKP4Q99569 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 RNU6-1159P-201ENST00000362933 107 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 SNORD114-19-201ENST00000363072 75 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 Y_RNA.307-201ENST00000365022 117 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 Y_RNA.376-201ENST00000365638 108 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 Y_RNA.439-201ENST00000384119 94 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 U8.10-201ENST00000384260 133 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 MT-TW-201ENST00000387382 68 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 SNORD78.2-201ENST00000391076 69 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.35□□□□□ -2.03
PKP4Q99569 EIF1P2-201ENST00000428233 350 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.35□□□□□ -2.03
PKP4Q99569 AL161788.1-201ENST00000441805 169 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AC016700.2-201ENST00000446011 156 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AP000870.1-201ENST00000472927 406 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AC025465.3-201ENST00000510570 311 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 RNU6-1198P-201ENST00000516904 67 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 SNORA48.11-201ENST00000517015 89 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.35□□□□□ -2.03
PKP4Q99569 AP003733.2-201ENST00000529409 171 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AC093023.1-201ENST00000547375 507 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AC027288.2-201ENST00000553028 243 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.35□□□□□ -2.03
PKP4Q99569 AC105137.2-201ENST00000569073 466 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 Y_RNA.772-201ENST00000606692 102 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AL450472.1-202ENST00000637286 180 ntBASIC2.35□□□□□ -2.03
PKP4Q99569 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PKP4Q99569 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PKP4Q99569 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PKP4Q99569 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.34□□□□□ -2.03
PKP4Q99569 RNU6-879P-201ENST00000364328 108 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 Y_RNA.319-201ENST00000365138 92 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.34□□□□□ -2.03
PKP4Q99569 SNORA36A-201ENST00000384221 132 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 Y_RNA.483-201ENST00000384380 101 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 Y_RNA.489-201ENST00000384410 101 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 RNU6-847P-201ENST00000411115 108 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.34□□□□□ -2.03
PKP4Q99569 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.34□□□□□ -2.03
PKP4Q99569 AC012306.1-201ENST00000423267 114 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
PKP4Q99569 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.34□□□□□ -2.03
PKP4Q99569 CKS1BP2-201ENST00000497342 240 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 AC026436.1-201ENST00000510537 270 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.34□□□□□ -2.03
PKP4Q99569 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 RNU6-1012P-201ENST00000516606 109 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 RNU6-567P-201ENST00000516746 107 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 AC023157.2-201ENST00000540596 141 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 MIR4435-1-201ENST00000582552 80 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 AL355297.2-201ENST00000604792 129 ntBASIC2.34□□□□□ -2.03
PKP4Q99569 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.34□□□□□ -2.03
PKP4Q99569 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
PKP4Q99569 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
PKP4Q99569 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
PKP4Q99569 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.34□□□□□ -2.04
PKP4Q99569 AC010615.1-201ENST00000594254 1764 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 Y_RNA.105-201ENST00000363182 111 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 SNORD115-8-201ENST00000363856 82 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 SNORD115-38-201ENST00000365037 82 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 RNU1-57P-201ENST00000384491 166 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 RNA5SP213-201ENST00000391031 106 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 RNU6-121P-201ENST00000410525 99 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 RPS26P42-201ENST00000413485 326 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 AC096638.1-201ENST00000444678 216 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms