Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC112492.4-201ENST00000456549 352 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 SNORA4.4-201ENST00000515921 135 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 RNA5SP281-201ENST00000516504 135 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.683-201ENST00000516508 93 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 RN7SKP49-201ENST00000516675 260 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 RNA5SP490-201ENST00000517141 136 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 IGKV3-31-201ENST00000523109 329 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HMGB4Q8WW32 MIR4524B-201ENST00000581569 115 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 MZT1P2-201ENST00000604387 248 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.45□□□□□ -2.02
HMGB4Q8WW32 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HMGB4Q8WW32 AC005592.1-201ENST00000566527 1640 ntBASIC2.45□□□□□ -2.02
HMGB4Q8WW32 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HMGB4Q8WW32 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 SNORD31B-201ENST00000364977 69 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.326-201ENST00000365176 113 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 MRPL42P3-201ENST00000401492 326 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 RNA5SP504-201ENST00000410676 117 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 MTCO3P19-201ENST00000415864 321 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 AC007395.1-201ENST00000451333 677 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 PRELID3BP1-201ENST00000457142 540 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 RNU6-991P-201ENST00000516168 107 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 AL442663.2-201ENST00000554385 511 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 AC016925.2-201ENST00000605108 242 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 SNORD11B-201ENST00000607707 90 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 AC091812.1-201ENST00000432235 1948 ntBASIC2.44□□□□□ -2.02
HMGB4Q8WW32 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HMGB4Q8WW32 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 MTND5P35-201ENST00000557537 1720 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 SNORA63-201ENST00000363450 132 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 SNORA33.2-201ENST00000365413 134 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 RNU6-708P-201ENST00000384217 107 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 RNU6-1026P-201ENST00000384465 108 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.645-201ENST00000391229 102 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 MIR300-201ENST00000401138 83 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AL033519.2-201ENST00000403958 392 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 IFNA11P-201ENST00000446352 526 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AC016925.1-201ENST00000458303 298 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AC093259.1-201ENST00000509755 300 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 RNU6-237P-201ENST00000515985 71 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 RRN3P3-201ENST00000549207 578 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 HSBP1P1-201ENST00000555205 166 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 MIR4769-201ENST00000584126 77 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 AC008873.1-201ENST00000625051 138 ntBASIC2.43□□□□□ -2.02
HMGB4Q8WW32 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.27-201ENST00000362540 103 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 RNU6-545P-201ENST00000362681 104 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 RNU6-727P-201ENST00000363592 107 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.332-201ENST00000365271 113 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC117470.1-201ENST00000381974 330 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HMGB4Q8WW32 SNORD12B-201ENST00000410433 91 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 SRIP3-201ENST00000413200 219 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC233702.2-202ENST00000562547 291 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC103810.6-201ENST00000606708 136 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.42□□□□□ -2.02
HMGB4Q8WW32 AC068205.3-201ENST00000636385 468 ntBASIC2.42□□□□□ -2.02
HMGB4Q8WW32 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
HMGB4Q8WW32 MTND4P1-201ENST00000457501 1466 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 VTRNA1-1-201ENST00000363120 99 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.158-201ENST00000363651 101 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 RNU6-438P-201ENST00000365561 103 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.415-201ENST00000384012 112 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 MIR586-201ENST00000385035 97 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 MIR1283-1-201ENST00000408494 87 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 Y_RNA.595-201ENST00000410403 105 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AL137159.1-201ENST00000452808 512 ntBASIC2.41□□□□□ -2.02
HMGB4Q8WW32 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.41□□□□□ -2.02
HMGB4Q8WW32 HMGN2P9-201ENST00000476875 229 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 249.7 ms