Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNU6-436P-201ENST00000516171 114 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 RNU1-143P-201ENST00000516296 146 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 SNORA64.4-201ENST00000516632 81 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 Y_RNA.703-201ENST00000516846 111 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 SNORA70.24-201ENST00000517233 118 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.78□□□□□ -1.96
CPEB3Q8NE35 AP005660.1-201ENST00000522972 293 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.78□□□□□ -1.96
CPEB3Q8NE35 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.78□□□□□ -1.96
CPEB3Q8NE35 AL008718.3-201ENST00000610217 321 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 U1.23-201ENST00000610293 146 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.78□□□□□ -1.96
CPEB3Q8NE35 uc_338.25-201ENST00000613756 156 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 RNU1-68P-201ENST00000615382 146 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 AL365265.1-201ENST00000621045 234 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 U1.39-201ENST00000621562 146 ntBASIC2.78□□□□□ -1.96
CPEB3Q8NE35 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.78□□□□□ -1.96
CPEB3Q8NE35 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CPEB3Q8NE35 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
CPEB3Q8NE35 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.78□□□□□ -1.97
CPEB3Q8NE35 AC026241.1-201ENST00000517873 2142 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 RNU6-653P-201ENST00000363074 106 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 CD24P4-201ENST00000382840 243 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 SNORA12-201ENST00000391162 147 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 SNORA11.1-201ENST00000408133 129 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 U3.40-201ENST00000408706 208 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 RNA5SP492-201ENST00000411330 114 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 AC024067.1-201ENST00000426199 223 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 snoU13.22-201ENST00000459428 104 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 RPS27P26-201ENST00000494583 239 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 Y_RNA.662-201ENST00000516028 97 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 RNU6-107P-201ENST00000516643 102 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 RNU2-44P-201ENST00000516795 194 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 RNU1-117P-201ENST00000517041 158 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 MIR3910-1-201ENST00000580936 111 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 AC021753.1-201ENST00000635724 168 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 AP003122.5-201ENST00000527668 3766 ntBASIC2.77□□□□□ -1.97
CPEB3Q8NE35 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.77□□□□□ -1.97
CPEB3Q8NE35 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 RNA5SP383-201ENST00000362934 120 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 SNORD56.3-201ENST00000363507 71 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 Y_RNA.170-201ENST00000363746 110 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 EIF4EP4-201ENST00000424916 578 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 BTF3P11-201ENST00000426582 477 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 MIR5692C2-201ENST00000577959 77 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AC006380.1-201ENST00000603598 186 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AC110079.1-202ENST00000635213 138 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AC009487.2-201ENST00000420969 6821 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CPEB3Q8NE35 AL161431.1-201ENST00000618966 4205 ntBASIC2.76□□□□□ -1.97
CPEB3Q8NE35 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 SNORD115-30-201ENST00000364117 82 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 RNA5SP387-201ENST00000364226 106 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 RNA5SP139-201ENST00000364340 117 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 Y_RNA.262-201ENST00000364641 102 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 MIR23A-201ENST00000385245 73 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 AL451074.5-201ENST00000415894 435 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 AC009414.1-201ENST00000427200 443 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 Z98742.2-201ENST00000431564 187 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 RPL23AP83-201ENST00000434984 473 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 AC146507.2-201ENST00000460608 476 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 RPS29P26-201ENST00000477483 171 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 RN7SL499P-201ENST00000481141 276 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 RNU6-1278P-201ENST00000516130 107 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 RNU6-1219P-201ENST00000516143 112 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 HSPE1P18-201ENST00000517602 280 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 MRPS18CP4-201ENST00000535821 231 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 AC091564.4-201ENST00000533934 2194 ntBASIC2.75□□□□□ -1.97
CPEB3Q8NE35 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.75□□□□□ -1.97
CPEB3Q8NE35 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CPEB3Q8NE35 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 273.2 ms