Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC112487.2-201ENST00000637950 304 ntBASIC2.16□□□□□ -2.06
ABCD3P28288 MTND5P10-201ENST00000603719 1809 ntBASIC2.16□□□□□ -2.06
ABCD3P28288 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ABCD3P28288 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.15□□□□□ -2.06
ABCD3P28288 AL159152.1-201ENST00000635019 2587 ntBASIC2.15□□□□□ -2.06
ABCD3P28288 U3.8-201ENST00000363675 217 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 RNA5SP126-201ENST00000365092 109 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 RNU6-418P-201ENST00000384035 107 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 RNA5SP213-201ENST00000391031 106 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ABCD3P28288 RNU6-1304P-201ENST00000411374 106 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 AC022028.1-201ENST00000412054 408 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
ABCD3P28288 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.15□□□□□ -2.07
ABCD3P28288 AC096920.1-201ENST00000423991 241 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 RNU7-152P-201ENST00000458982 64 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 MIR2053-201ENST00000459295 91 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 RNU7-57P-201ENST00000459540 60 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.15□□□□□ -2.07
ABCD3P28288 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 ZNF702P-202ENST00000434269 1966 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.07
ABCD3P28288 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ABCD3P28288 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ABCD3P28288 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ABCD3P28288 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ABCD3P28288 RNU6-874P-201ENST00000362390 105 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 Y_RNA.67-201ENST00000362870 100 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 RNU6-490P-201ENST00000362985 107 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 Y_RNA.187-201ENST00000363918 113 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 RNU6-1040P-201ENST00000383974 107 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 SNORA48.1-201ENST00000390879 135 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 RNA5SP504-201ENST00000410676 117 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 RNA5SP508-201ENST00000411327 119 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCD3P28288 AC099799.1-201ENST00000439809 192 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCD3P28288 ATP5J2P3-201ENST00000451550 258 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 RPL23AP3-201ENST00000453844 468 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.14□□□□□ -2.07
ABCD3P28288 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCD3P28288 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ABCD3P28288 AC005034.5-201ENST00000604219 466 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 AC013412.1-201ENST00000610687 192 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 MIR1244-1-201ENST00000612829 85 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 AC083806.3-201ENST00000614016 455 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 AC084781.2-201ENST00000615568 161 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 snoZ196.1-201ENST00000625269 89 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 MIR1244-3-201ENST00000635744 85 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 MIR1244-2-201ENST00000636449 85 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 MIR1244-4-202ENST00000636813 85 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
ABCD3P28288 MTND5P35-201ENST00000557537 1720 ntBASIC2.14□□□□□ -2.07
ABCD3P28288 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ABCD3P28288 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.13□□□□□ -2.07
ABCD3P28288 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ABCD3P28288 RNU4-73P-201ENST00000363164 141 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 Y_RNA.358-201ENST00000365491 99 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 Y_RNA.557-201ENST00000384680 107 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 RNU6-1156P-201ENST00000410365 100 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 RPS15AP28-201ENST00000435088 386 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 AC144568.1-201ENST00000520139 137 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.13□□□□□ -2.07
ABCD3P28288 AL353149.1-201ENST00000610667 244 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.13□□□□□ -2.07
ABCD3P28288 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.13□□□□□ -2.07
ABCD3P28288 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 AC073544.1-201ENST00000600110 1595 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 AL596028.1-201ENST00000326971 197 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 RNU6-727P-201ENST00000363592 107 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 Y_RNA.415-201ENST00000384012 112 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 SNORA69.1-201ENST00000390904 137 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 RNA5SP212-201ENST00000391223 107 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 SNORA11.4-201ENST00000408823 129 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 Y_RNA.595-201ENST00000410403 105 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 RNA5SP501-201ENST00000410990 112 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 AC114482.1-201ENST00000418010 247 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 AC008134.1-201ENST00000420943 193 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCD3P28288 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCD3P28288 AC093027.1-201ENST00000546698 429 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 AC125232.2-201ENST00000592457 143 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 MZT1P2-201ENST00000604387 248 ntBASIC2.12□□□□□ -2.07
ABCD3P28288 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.12□□□□□ -2.07
ABCD3P28288 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ABCD3P28288 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ABCD3P28288 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 Y_RNA.146-201ENST00000363549 102 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 RNU6-879P-201ENST00000364328 108 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 RNU6-867P-201ENST00000364956 107 ntBASIC2.11□□□□□ -2.07
ABCD3P28288 RNU6-1001P-201ENST00000411265 100 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms