Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-944P-201ENST00000364023 107 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 Y_RNA.326-201ENST00000365176 113 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 RNA5SP240-201ENST00000365355 128 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 SNORA12-201ENST00000391162 147 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 MIR934-201ENST00000401241 83 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 CBX3P9-201ENST00000402326 552 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 MIR548P-201ENST00000408336 84 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 MIR1261-201ENST00000408659 82 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 RNA5SP494-201ENST00000410653 129 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC018865.2-201ENST00000423631 129 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC078809.1-201ENST00000427601 140 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC005534.2-201ENST00000431047 433 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.71□□□□□ -2.14
HDAC3O15379 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.71□□□□□ -2.14
HDAC3O15379 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.71□□□□□ -2.14
HDAC3O15379 AC009238.1-201ENST00000442165 424 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC009237.6-201ENST00000446969 424 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 CHEK2P4-201ENST00000450340 246 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AL513124.1-201ENST00000450410 614 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.71□□□□□ -2.14
HDAC3O15379 RPL30P10-201ENST00000488148 337 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC104564.1-201ENST00000493028 407 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.71□□□□□ -2.14
HDAC3O15379 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.71□□□□□ -2.14
HDAC3O15379 Y_RNA.711-201ENST00000516993 102 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 HSPE1P18-201ENST00000517602 280 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AL356157.2-201ENST00000605122 111 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 MIR1244-1-201ENST00000612829 85 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC007485.1-201ENST00000616755 206 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 AC091925.1-201ENST00000623204 462 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 MIR1244-3-201ENST00000635744 85 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 MIR1244-2-201ENST00000636449 85 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 MIR1244-4-202ENST00000636813 85 ntBASIC1.71□□□□□ -2.14
HDAC3O15379 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
HDAC3O15379 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.71□□□□□ -2.14
HDAC3O15379 AC233981.2-201ENST00000611524 1614 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 Y_RNA.112-201ENST00000363250 102 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 RNU1-23P-201ENST00000363361 144 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 Y_RNA.128-201ENST00000363391 112 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 Y_RNA.148-201ENST00000363557 117 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 SNORA22B-201ENST00000383876 138 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 U8.10-201ENST00000384260 133 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 MIR549A-201ENST00000385268 96 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HDAC3O15379 AL079342.1-201ENST00000401460 267 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 MIR1302-11-201ENST00000408051 138 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 MIR1302-9-201ENST00000408365 138 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 MIR1302-10-201ENST00000408734 138 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 RNA5SP201-201ENST00000410316 124 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC096644.2-201ENST00000429278 159 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AL160004.2-201ENST00000432935 350 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.7□□□□□ -2.14
HDAC3O15379 Y_RNA.631-201ENST00000459607 101 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.7□□□□□ -2.14
HDAC3O15379 RPL23AP75-201ENST00000491601 451 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC145146.1-201ENST00000496370 254 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HDAC3O15379 Y_RNA.661-201ENST00000516003 99 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 SCARNA15.1-201ENST00000516384 125 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC115990.1-201ENST00000526957 301 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.7□□□□□ -2.14
HDAC3O15379 AC104581.2-201ENST00000572227 430 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AL138963.2-201ENST00000605137 226 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC116312.1-201ENST00000606841 314 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 MIR1302-2-201ENST00000607096 138 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC133104.2-201ENST00000615272 193 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC090517.3-201ENST00000625170 141 ntBASIC1.7□□□□□ -2.14
HDAC3O15379 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.69□□□□□ -2.14
HDAC3O15379 Y_RNA.80-201ENST00000362996 102 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
HDAC3O15379 Y_RNA.405-201ENST00000383979 100 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 Y_RNA.451-201ENST00000384200 100 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 Y_RNA.485-201ENST00000384395 102 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 RNY1P14-201ENST00000384426 108 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 Y_RNA.524-201ENST00000384564 100 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 Y_RNA.561-201ENST00000384694 100 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 AC019129.1-201ENST00000403786 261 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 RNA5SP450-201ENST00000411206 102 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.69□□□□□ -2.14
HDAC3O15379 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.69□□□□□ -2.14
HDAC3O15379 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.69□□□□□ -2.14
HDAC3O15379 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HDAC3O15379 TOMM22P6-201ENST00000465035 409 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 AC087477.1-201ENST00000465747 340 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 AL163540.1-201ENST00000485382 386 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 RPL17P19-201ENST00000489069 552 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.69□□□□□ -2.14
HDAC3O15379 RNU6-976P-201ENST00000516086 111 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.69□□□□□ -2.14
HDAC3O15379 AC021231.3-201ENST00000558497 370 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 SUB1P3-201ENST00000564581 315 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 AC005899.2-201ENST00000584353 90 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 AC040896.1-201ENST00000613819 479 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 SCARNA4-201ENST00000629045 128 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 ZNF72P-201ENST00000425869 1908 ntBASIC1.69□□□□□ -2.14
HDAC3O15379 RNU6-490P-201ENST00000362985 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms