Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-767P-201ENST00000384132 107 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.473-201ENST00000384333 102 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR518E-201ENST00000385252 88 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC004866.1-201ENST00000411748 78 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 RPL21P111-201ENST00000418453 477 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 MTND4LP16-201ENST00000440828 295 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 DAP3P1-201ENST00000441522 278 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC007215.1-201ENST00000464893 276 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC093259.1-201ENST00000509755 300 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-970P-201ENST00000516312 107 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC016727.2-201ENST00000603988 621 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC019193.3-201ENST00000609144 554 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 RMST_6.1-201ENST00000611980 203 ntBASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
TMX2-CTNND1H3BSU7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU1-76P-201ENST00000362903 159 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.88-201ENST00000363029 99 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 U3.9-201ENST00000363823 204 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-26P-201ENST00000383985 107 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-1013P-201ENST00000384180 107 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.474-201ENST00000384341 102 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR549A-201ENST00000385268 96 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 SNORA40.19-201ENST00000390846 128 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR548F5-201ENST00000408421 86 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC243428.1-201ENST00000421099 264 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 EIF4EP2-201ENST00000422816 654 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 HMGN2P18-201ENST00000450680 270 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC114801.2-201ENST00000503825 781 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-1098P-201ENST00000516772 96 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC109446.1-201ENST00000566172 220 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR4790-201ENST00000577799 79 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 POLR3GP2-201ENST00000588366 668 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 SNRPGP17-201ENST00000603780 214 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC018462.2-201ENST00000605375 395 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL022345.1-201ENST00000607292 135 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.42□□□□□ -2.18
TMX2-CTNND1H3BSU7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 SNORD114-6-201ENST00000364393 72 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-968P-201ENST00000384076 107 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR518A2-201ENST00000384966 87 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-876P-201ENST00000391295 104 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR208B-201ENST00000401172 77 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 SRIP3-201ENST00000413200 219 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC007098.1-201ENST00000420122 367 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC244636.1-201ENST00000421152 228 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL353572.1-201ENST00000442490 417 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 OR2AQ1P-201ENST00000451972 200 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC087477.1-201ENST00000465747 340 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC103851.1-201ENST00000506833 274 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 Y_RNA.670-201ENST00000516255 105 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 RNU6-567P-201ENST00000516746 107 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL031274.2-201ENST00000599419 203 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR6504-201ENST00000613520 61 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 MIR6128-201ENST00000615528 109 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AC022513.1-201ENST00000624512 117 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 SCARNA4-201ENST00000629045 128 ntBASIC1.41□□□□□ -2.18
TMX2-CTNND1H3BSU7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.404-201ENST00000383978 102 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNORA67.2-201ENST00000384300 149 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-790P-201ENST00000384479 105 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 Y_RNA.533-201ENST00000384596 114 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNU6-1093P-201ENST00000391194 107 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 RNA5SP494-201ENST00000410653 129 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC096920.1-201ENST00000423991 241 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 AL035666.1-201ENST00000446195 348 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 RPL30P10-201ENST00000488148 337 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 PRDX4P1-201ENST00000507189 574 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR5701-3-201ENST00000578890 82 ntBASIC1.4□□□□□ -2.19
TMX2-CTNND1H3BSU7 MIR5701-1-201ENST00000585138 82 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms